RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 C3orf58Q8NDZ4 430 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 RNF34Q969K3 372 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 HDAC11Q96DB2 347 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 OXNAD1Q96HP4 312 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 HAPLN3Q96S86 360 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 C17orf80Q9BSJ5 609 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 TSSK1BQ9BXA7 367 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 TRIM55Q9BYV6 548 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 SAR1AQ9NR31 198 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 COX16Q9P0S2 106 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 SLC17A7Q9P2U7 560 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 OR12D3Q9UGF7 316 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 TIMM13Q9Y5L4 95 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 PATJQ8NI35 1801 aa11.3□□□□□ -0.6
ERGIC3-207ENST00000438317 NLRC5Q86WI3 1866 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ABHD14A-ACY1A0A1B0GW23 586 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 CXorf49A8MYA2 514 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 MGEA5O60502 916 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 RFPL1O75677 317 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ATP5BP06576 529 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 CCNB1P14635 433 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 NQO1P15559 274 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SELPP16109 830 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 BDNFP23560 247 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 GARSP41250 739 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SERPINB4P48594 390 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 AFF1P51825 1210 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 NCALDP61601 193 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ELF3P78545 371 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 MGAT5Q09328 741 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 GALNT2Q10471 571 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SNCBQ16143 134 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 INSCQ1MX18 579 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SPRED3Q2MJR0 410 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 TEX44Q53QW1 395 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ARMC3Q5W041 872 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 CASC4Q6P4E1 433 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 CYB5D1Q6P9G0 228 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 CD300LGQ6UXG3 332 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 KYAT3Q6YP21 454 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 LRRC8DQ7L1W4 858 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 LINC00523Q86TU6 105 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ZNF598Q86UK7 904 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 DCP1BQ8IZD4 617 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 C10orf82Q8WW14 230 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ATP2A3Q93084 1043 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 TSGA13Q96PP4 275 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 RAB3IPQ96QF0 476 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SRPK1Q96SB4 655 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 LRRC40Q9H9A6 602 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 PLAC1Q9HBJ0 212 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 ARHGEF3Q9NR81 526 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 RGS18Q9NS28 235 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 SEPT10Q9P0V9 454 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 FNIP2Q9P278 1114 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
ERGIC3-207ENST00000438317 WDR27A2RRH5 827 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 TMEM189-UBE2V1I3L0A0 370 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 I3L4J1 428 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 CHUKO15111 745 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 FGF10O15520 208 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 AP2A1O95782 977 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 POMCP01189 267 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 IGFBP6P24592 240 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 CCNCP24863 283 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 PTPN3P26045 913 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 PSMB4P28070 264 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 SLC8A1P32418 973 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 IRS1P35568 1242 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 BRCC3P46736 316 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 FAM189BP81408 668 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.62e-11■■■□□ 15.9
ERGIC3-207ENST00000438317 MTM1Q13496 603 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 BTBD8Q5XKL5 378 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 GLB1LQ6UWU2 654 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 BHLHA9Q7RTU4 235 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 GPRIN1Q7Z2K8 1008 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 ARHGAP18Q8N392 663 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 MPP5Q8N3R9 675 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 RNF169Q8NCN4 708 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 PRSS33Q8NF86 280 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 URGCPQ8TCY9 931 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 INPP5DQ92835 1189 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms