RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TPX2Q9ULW0 747 aaKnown RBP12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DMTF1Q9Y222 760 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PCDHA5Q9Y5H7 936 aa12.75□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NEMP2A6NFY4 417 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MUSKO15146 869 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SLC31A1O15431 190 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TCEA3O75764 348 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 STAU1O95793 577 aaKnown RBP12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 IL1BP01584 269 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PRLRP16471 622 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 UBA7P41226 1012 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CSKP41240 450 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CD97P48960 835 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ST8SIA6P61647 398 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PTK2Q05397 1052 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TRPC3Q13507 836 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 RAB11FIP2Q7L804 512 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZSCAN1Q8NBB4 408 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TTC17Q96AE7 1141 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CCDC127Q96BQ5 260 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DUSP23Q9BVJ7 150 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 EPB41L5Q9HCM4 733 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 FZD3Q9NPG1 666 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SLCO3A1Q9UIG8 710 aa12.74□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ADH1BP00325 375 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 VAV1P15498 845 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MZF1P28698 734 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DCTP40126 519 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NDST1P52848 882 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CLDN2P57739 230 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TRIP4Q15650 581 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DEFB133Q30KQ1 61 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZCCHC8Q6NZY4 707 aaKnown RBP12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 RFWD3Q6PCD5 774 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 BORAQ6PGQ7 559 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TRIM69Q86WT6 500 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TICAM1Q8IUC6 712 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CRYBG2Q8N1P7 616 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TPCN2Q8NHX9 752 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PTPRN2Q92932 1015 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 FAM131CQ96AQ9 280 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DNAJC19Q96DA6 116 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CGRRF1Q99675 332 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SLC12A9Q9BXP2 914 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 USP3Q9Y6I4 520 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MED13Q9UHV7 2174 aa12.73□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 UBE4BO95155 1302 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PRAMEF33A0A0G2JMD5 474 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TARSL2A2RTX5 802 aaKnown RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PLRG1O43660 514 aaKnown RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PRAMEF10O60809 474 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TBL1XO60907 577 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ITIH1P19827 911 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NUMBP49757 651 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MLLT10P55197 1068 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 COPS2P61201 443 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TMEM164Q5U3C3 297 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 RASSF8Q8NHQ8 419 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 STK32AQ8WU08 396 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 JPH3Q8WXH2 748 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PLD4Q96BZ4 506 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CDK5RAP1Q96SZ6 601 aaKnown RBP12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 FOXP3Q9BZS1 431 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 FOXJ2Q9P0K8 574 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SEPT10Q9P0V9 454 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 STIM2Q9P246 746 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PISDQ9UG56 409 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KLF15Q9UIH9 416 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SARDHQ9UL12 918 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 STRIP2Q9ULQ0 834 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 F8P00451 2351 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 EDDM13A0A1B0GTR0 161 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NTN3O00634 580 aaPredicted RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NVLO15381 856 aaKnown RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SLC26A4O43511 780 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SEMA7AO75326 666 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CLSTN1O94985 981 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KIF20AO95235 890 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 KRT7P08729 469 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ATICP31939 592 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NUDT1P36639 197 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SPIDRQ14159 915 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NR0B2Q15466 257 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 AGBL4Q5VU57 503 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms