RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 RNF4P78317 190 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 KLRC3Q07444 240 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 IDI1Q13907 227 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 TNIP1Q15025 636 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 NR0B2Q15466 257 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 NAB2Q15742 525 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 GPR19Q15760 415 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 EXOC3L4Q17RC7 722 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 TDRD12Q587J7 1177 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 FIGNQ5HY92 759 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 DCLRE1AQ6PJP8 1040 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 RAPH1Q70E73 1250 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CABP7Q86V35 215 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 SLC44A2Q8IWA5 706 aaPredicted RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 METTL25Q8N6Q8 603 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ARRDC4Q8NCT1 418 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 LSM14AQ8ND56 463 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 ACTRT1Q8TDG2 376 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 U2AF1L4Q8WU68 220 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 STARD8Q92502 1023 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 DLG3Q92796 817 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ATP2A3Q93084 1043 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 DGCR14Q96DF8 476 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 CEP295NLQ96MC4 621 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ERGIC2Q96RQ1 377 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CCT7Q99832 543 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ACAT2Q9BWD1 397 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 SYNCQ9H7C4 482 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ACSS2Q9NR19 701 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 DNMT3LQ9UJW3 386 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 UTP11Q9Y3A2 253 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 TRIM17Q9Y577 477 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 MATN2O00339 956 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CES2O00748 559 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 RASGRF2O14827 1237 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CBFA2T3O75081 653 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ENDOD1O94919 500 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 MT-ND5P03915 603 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 PIM1P11309 404 aaPredicted RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 TAC1P20366 129 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 FPR2P25090 351 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 GABRB3P28472 473 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 MTIF2P46199 727 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 ACADVLP49748 655 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 COG7P83436 770 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 TFCP2Q12800 502 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 SMAD4Q13485 552 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 SPIDRQ14159 915 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 NFE2L1Q14494 772 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 RPS6KA1Q15418 735 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 TAF1BQ53T94 588 aaPredicted RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 GPR139Q6DWJ6 353 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 TTI2Q6NXR4 508 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ZDHHC24Q6UX98 284 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 UNC13DQ70J99 1090 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 GALNT11Q8NCW6 608 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 THAP4Q8WY91 577 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 NEIL1Q96FI4 390 aaPredicted RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 FBXL18Q96ME1 805 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 STMN4Q9H169 189 aaPredicted RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 SLITRK6Q9H5Y7 841 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 CYP4F11Q9HBI6 524 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 KCNK9Q9NPC2 374 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 ANGPTL2Q9UKU9 493 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 HSF4Q9ULV5 492 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 HEMK1Q9Y5R4 338 aaPredicted RBP6.31□□□□□ -1.4
VRK2-206ENST00000435505 NUMBLQ9Y6R0 609 aa6.31□□□□□ -1.4
VRK2-206ENST00000435505 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 PLSCR1O15162 318 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 SIGLEC6O43699 453 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 BMP1P13497 986 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 SYN1P17600 705 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 HDCP19113 662 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 S100A1P23297 94 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 CRABP2P29373 138 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 TKTP29401 623 aaKnown RBP6.3□□□□□ -1.4
VRK2-206ENST00000435505 SLC5A2P31639 672 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 STX2P32856 288 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 SLC19A1P41440 591 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 PRKCIP41743 596 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 TUFMP49411 452 aaKnown RBP6.3□□□□□ -1.4
VRK2-206ENST00000435505 LIMK1P53667 647 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 THOC5Q13769 683 aaKnown RBP6.3□□□□□ -1.4
VRK2-206ENST00000435505 CYTH1Q15438 398 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 SHROOM1Q2M3G4 852 aaPredicted RBP6.3□□□□□ -1.4
VRK2-206ENST00000435505 NADK2Q4G0N4 442 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 DEPDC1Q5TB30 811 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 MFSD5Q6N075 450 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 METTL13Q8N6R0 699 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 CYP2W1Q8TAV3 490 aa6.3□□□□□ -1.4
VRK2-206ENST00000435505 PLEKHO2Q8TD55 490 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms