RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 APOBEC3GQ9HC16 384 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 DUS2Q9NX74 493 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 COPG2Q9UBF2 871 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 PRELID1Q9Y255 219 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 COQ4Q9Y3A0 265 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 GPSM3Q9Y4H4 160 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 HES2Q9Y543 173 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 V9GYQ6 96 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 FAM189A1O60320 539 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 LRCH4O75427 683 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 C1QAP02745 245 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 JUNP05412 331 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 DLG2Q15700 870 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 RAB6CQ53S08 254 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 GPAT2Q6NUI2 795 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 EEPD1Q7L9B9 569 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 TEKT3Q9BXF9 490 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 RAB6CQ9H0N0 254 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 CDY2AQ9Y6F7 541 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 CDY1Q9Y6F8 540 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 KIAA1551Q9HCM1 1747 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 LOC102724428A0A0B4J2F2 783 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 TNPO2O14787 897 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 MAN1A2O60476 641 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 GLRA3O75311 464 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 MYL4P12829 197 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SHMT1P34896 483 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 RARRES1P49788 294 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 LIG4P49917 911 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 HSD17B4P51659 736 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SIK1P57059 783 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 RAB15P59190 212 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SELENBP1Q13228 472 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 HADHQ16836 314 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SPDYE2Q495Y8 402 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 FAM209AQ5JX71 171 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 USP43Q70EL4 1123 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 TAS2R42Q7RTR8 314 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 PLD6Q8N2A8 252 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 CANT1Q8WVQ1 401 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 FAR2Q96K12 515 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 MUC3BQ9H195 1237 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 PARVBQ9HBI1 364 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 BTG4Q9NY30 223 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 TBX20Q9UMR3 447 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 ERVK-11Q9UQG0 969 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 GAKO14976 1311 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SMCHD1A6NHR9 2005 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 WDR27A2RRH5 827 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 LTFP02788 710 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 KRT3P12035 628 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 ALDH4A1P30038 563 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 HPCAL1P37235 193 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 C1QBPQ07021 282 aaKnown RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 PSD4Q8NDX1 1056 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 CNDP1Q96KN2 507 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 MIR1-1HGQ9H1L0 117 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 SNX25Q9H3E2 840 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 FANCEQ9HB96 536 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 XPNPEP3Q9NQH7 507 aa7.6□□□□□ -1.19
CPSF6-202ENST00000435070 RBAKQ9NYW8 714 aaPredicted RBP7.6□□□□□ -1.19
CPSF6-202ENST00000435070 NT5C2P49902 561 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 RPS3AP61247 264 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PSME3P61289 254 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PRKCQQ04759 706 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CUL2Q13617 745 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 KCNJ11Q14654 390 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ZIK1Q3SY52 487 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 EPGNQ6UW88 154 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 TMC5Q6UXY8 1006 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PHF13Q86YI8 300 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PGAM4Q8N0Y7 254 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 FLCNQ8NFG4 579 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 TRUB1Q8WWH5 349 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 DLG3Q92796 817 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 FEM1CQ96JP0 617 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 MAELQ96JY0 434 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CGREF1Q99674 301 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ADI1Q9BV57 179 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 DGCR6LQ9BY27 220 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 TP63Q9H3D4 680 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CAB39LQ9H9S4 337 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 KMT5AQ9NQR1 393 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 RIC8BQ9NVN3 520 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 LRP5O75197 1615 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ACOT8O14734 319 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GRAP2O75791 330 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GABBR2O75899 941 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 SERPINB2P05120 415 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GLRBP48167 497 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PIGHQ14442 188 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 Q3C1V9 767 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 INAVAQ3KP66 663 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GLRA4Q5JXX5 417 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 SH3PXD2AQ5TCZ1 1133 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 UBE2UQ5VVX9 321 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ARFGAP1Q8N6T3 406 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ALPK1Q96QP1 1244 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms