RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 KLHL11Q9NVR0 708 aa15.92■□□□□ 0.14
TREX1-201ENST00000433541 TMEM248Q9NWD8 314 aa15.92■□□□□ 0.14
TREX1-201ENST00000433541 ZSCAN32Q9NX65 697 aa15.92■□□□□ 0.14
TREX1-201ENST00000433541 DONSONQ9NYP3 566 aa15.92■□□□□ 0.14
TREX1-201ENST00000433541 EML5Q05BV3 1969 aa15.92■□□□□ 0.14
TREX1-201ENST00000433541 FANCMQ8IYD8 2048 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 A0A0D9SEW6 157 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 ILVBLA1L0T0 632 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 K7ESF4 209 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 AXIN1O15169 862 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 BUB1O43683 1085 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 BNIP3LO60238 219 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 PAPSS2O95340 614 aaPredicted RBP15.91■□□□□ 0.14
TREX1-201ENST00000433541 SRPRAP08240 638 aaKnown RBP15.91■□□□□ 0.14
TREX1-201ENST00000433541 KRT7P08729 469 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 GOT1P17174 413 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 MAN1A1P33908 653 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 STK19P49842 368 aaPredicted RBP15.91■□□□□ 0.14
TREX1-201ENST00000433541 PLK1P53350 603 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 CDH6P55285 790 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 DMWDQ09019 674 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 POLD3Q15054 466 aaPredicted RBP15.91■□□□□ 0.14
TREX1-201ENST00000433541 KIAA1211LQ6NV74 962 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 CPNE8Q86YQ8 564 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 TMEM139Q8IV31 216 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 RTL3Q8N8U3 475 aaKnown RBP15.91■□□□□ 0.14
TREX1-201ENST00000433541 ATP11CQ8NB49 1132 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 KCTD6Q8NC69 237 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 TEKT4Q8WW24 435 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 LMLNQ96KR4 655 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 GABRG3Q99928 467 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 CALN1Q9BXU9 219 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 RETREG1Q9H6L5 497 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 HCN2Q9UL51 889 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 R4GN57 208 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 SHROOM3Q8TF72 1996 aa15.91■□□□□ 0.14
TREX1-201ENST00000433541 CHD5Q8TDI0 1954 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 MTA2O94776 668 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 HOXC13P31276 330 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 VAV2P52735 878 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 ZNF135P52742 658 aaPredicted RBP15.9■□□□□ 0.14
TREX1-201ENST00000433541 SLC25A11Q02978 314 aaKnown RBP15.9■□□□□ 0.14
TREX1-201ENST00000433541 KIF5AQ12840 1032 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 PTPRNQ16849 979 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 TXNRD3NBQ6F5E7 133 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 ZNF783Q6ZMS7 281 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 CYP4V2Q6ZWL3 525 aaPredicted RBP15.9■□□□□ 0.14
TREX1-201ENST00000433541 CEP68Q76N32 757 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 DAAM2Q86T65 1068 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 NLRP14Q86W24 1093 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 LONP2Q86WA8 852 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 MAP7D3Q8IWC1 876 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 DCAF4L2Q8NA75 395 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 MDGA1Q8NFP4 955 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 MAGEH1Q9H213 219 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 NDFIP2Q9NV92 336 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 SUN2Q9UH99 717 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 VPS51Q9UID3 782 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 HYOU1Q9Y4L1 999 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 PCDHGA2Q9Y5H1 932 aa15.9■□□□□ 0.14
TREX1-201ENST00000433541 SPAG17Q6Q759 2223 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 A0A0A6YYK5 440 aaPredicted RBP15.89■□□□□ 0.13
TREX1-201ENST00000433541 TTC34A8MYJ7 566 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 ARHGAP6O43182 974 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 SNAP91O60641 907 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 ACADMP11310 421 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 ERCC2P18074 760 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 ACVRL1P37023 503 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 SLC1A1P43005 524 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 SEMA3BQ13214 749 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 DPYSL2Q16555 572 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 USP39Q53GS9 565 aaKnown RBP15.89■□□□□ 0.13
TREX1-201ENST00000433541 RETSATQ6NUM9 610 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 LINGO4Q6UY18 593 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 PRR23BQ6ZRT6 265 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 CELF6Q96J87 481 aaKnown RBP15.89■□□□□ 0.13
TREX1-201ENST00000433541 SPACA7Q96KW9 195 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 PCDH18Q9HCL0 1135 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 CWC15Q9P013 229 aaKnown RBP15.89■□□□□ 0.13
TREX1-201ENST00000433541 SLCO3A1Q9UIG8 710 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 RAB23Q9ULC3 237 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 NEU3Q9UQ49 428 aa15.89■□□□□ 0.13
TREX1-201ENST00000433541 EDDM13A0A1B0GTR0 161 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 A0A1W2PQF6 199 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 MACROD2A1Z1Q3 448 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 LRRD1A4D1F6 860 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 DFFAO00273 331 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 BUB1BO60566 1050 aaPredicted RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 RNASEH1O60930 286 aaKnown RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 KRT1P04264 644 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 GABRG2P18507 467 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 COMTP21964 271 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 GLDCP23378 1020 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 DNA2P51530 1060 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 TAS2R40P59535 323 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 GSE1Q14687 1217 aa15.88■□□□□ 0.13
TREX1-201ENST00000433541 IFI16Q16666 785 aaKnown RBP15.88■□□□□ 0.13
TREX1-201ENST00000433541 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms