RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ARSAP15289 507 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 CACNA2D1P54289 1103 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 EIF3BP55884 814 aaKnown RBP6.45□□□□□ -1.38
USP54-206ENST00000433394 GOLGA8DPQ0D2H9 430 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 SLC14A1Q13336 389 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 EIF4A2Q14240 407 aaKnown RBP6.45□□□□□ -1.38
USP54-206ENST00000433394 IL13RA2Q14627 380 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 KCTD2Q14681 263 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 AP5B1Q2VPB7 878 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 GJB7Q6PEY0 223 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 NGEFQ8N5V2 710 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 ANKRD52Q8NB46 1076 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 NEU4Q8WWR8 484 aaPredicted RBP6.45□□□□□ -1.38
USP54-206ENST00000433394 PIGKQ92643 395 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 ENTPD7Q9NQZ7 604 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 TBC1D14Q9P2M4 693 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 SLC25A10Q9UBX3 287 aaPredicted RBP6.45□□□□□ -1.38
USP54-206ENST00000433394 TLK1Q9UKI8 766 aa6.45□□□□□ -1.38
USP54-206ENST00000433394 TEX13CA0A0J9YWL9 993 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 GRID2IPA4D2P6 1211 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 FAM90A7PA6NKC0 464 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 C16orf96A6NNT2 1141 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 FAM90A22PA8MWA6 464 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 FAM90A12PA8MX19 464 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 FAM90A23PA8MXZ1 464 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 TARM1B6A8C7 271 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 AP3D1O14617 1153 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 PER2O15055 1255 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 FIBPO43427 364 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 USO1O60763 962 aaKnown RBP6.44□□□□□ -1.38
USP54-206ENST00000433394 SPARCP09486 303 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 ABCD1P33897 745 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 GJC1P36383 396 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 HARS2P49590 506 aaKnown RBP6.44□□□□□ -1.38
USP54-206ENST00000433394 ZNF84P51523 738 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 ERV3-1Q14264 604 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 SLC45A4Q5BKX6 768 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 SLC30A9Q6PML9 568 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 CCDC129Q6ZRS4 1044 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 H1FNTQ75WM6 255 aaPredicted RBP6.44□□□□□ -1.38
USP54-206ENST00000433394 RPAP2Q8IXW5 612 aaPredicted RBP6.44□□□□□ -1.38
USP54-206ENST00000433394 CCDC105Q8IYK2 499 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 PDILTQ8N807 584 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 DNAAF1Q8NEP3 725 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 ZMIZ2Q8NF64 920 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 METTL6Q8TCB7 284 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 RAB40AQ8WXH6 277 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 HSPH1Q92598 858 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 ATP2A3Q93084 1043 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 ELP4Q96EB1 424 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 KAZALD1Q96I82 304 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 MPHOSPH8Q99549 860 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 TIMP4Q99727 224 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 MACROD1Q9BQ69 325 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP54-206ENST00000433394 CCDC68Q9H2F9 335 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 PRDM13Q9H4Q3 707 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 SYNCQ9H7C4 482 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 TLR8Q9NR97 1041 aaKnown RBP6.44□□□□□ -1.38
USP54-206ENST00000433394 SLC22A11Q9NSA0 550 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP54-206ENST00000433394 ASIC5Q9NY37 505 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 SARDHQ9UL12 918 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 DTX4Q9Y2E6 619 aa6.44□□□□□ -1.38
USP54-206ENST00000433394 OR6C68A6NDL8 312 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 SMIM22K7EJ46 135 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 GTPBP1O00178 669 aaKnown RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 TCERG1O14776 1098 aaKnown RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 CBX6O95503 412 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 CLEC3BP05452 202 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 CD63P08962 238 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 RFPL3SP0C7P2 107 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 WT1P19544 449 aaPredicted RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 AVPR2P30518 371 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 CHRNA5P30532 468 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 CPA2P48052 419 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 CYP2J2P51589 502 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 DRG2P55039 364 aaKnown RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 UFM1P61960 85 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 PTP4A2Q12974 167 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 MTA1Q13330 715 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 GALNT3Q14435 633 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 TBCEQ15813 527 aaPredicted RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 EDRF1Q3B7T1 1238 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 SH2D4BQ5SQS7 431 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 TMEM268Q5VZI3 342 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 BRINP3Q76B58 766 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 MON1AQ86VX9 555 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 C11orf65Q8NCR3 313 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 SNRNP27Q8WVK2 155 aaKnown RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 SMARCE1Q969G3 411 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 KLHL29Q96CT2 875 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP54-206ENST00000433394 ZNF747Q9BV97 191 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 RANBP17Q9H2T7 1088 aaKnown RBP6.43□□□□□ -1.38
USP54-206ENST00000433394 HAUS2Q9NVX0 235 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 KAT6AQ92794 2004 aa6.43□□□□□ -1.38
USP54-206ENST00000433394 DPPA5A6NC42 116 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 PRSS47A8MTI9 375 aa6.42□□□□□ -1.38
USP54-206ENST00000433394 MSI1O43347 362 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms