RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ZNF775Q96BV0 537 aaPredicted RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CPXM1Q96SM3 734 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ASNSD1Q9NWL6 643 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FBXL12Q9NXK8 326 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FKBPLQ9UIM3 349 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FZD4Q9ULV1 537 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ERVW-1Q9UQF0 538 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ANKRD6Q9Y2G4 727 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PCDHB9Q9Y5E1 797 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 NYNRINQ9P2P1 1898 aaKnown RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 EDDM13A0A1B0GTR0 161 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SRRM3A6NNA2 597 aaPredicted RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TTC34A8MYJ7 566 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 F5H5T6 163 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MID1O15344 667 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CAPN5O15484 640 aaPredicted RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RNASEH1O60930 286 aaKnown RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 HSF2BPO75031 334 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FSBPO95073 299 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MOCS3O95396 460 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC2A3P11169 496 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PON1P27169 355 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GALCP54803 685 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 UBE2HP62256 183 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CDK17Q00537 523 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC12A1Q13621 1099 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CAMK4Q16566 473 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ARHGAP44Q17R89 818 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 EXOC3L4Q17RC7 722 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KCNT1Q5JUK3 1230 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TTC39BQ5VTQ0 682 aaPredicted RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KIAA0895LQ68EN5 471 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CXorf57Q6NSI4 855 aaKnown RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OLFML1Q6UWY5 402 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 LAYNQ6UX15 382 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLCO6A1Q86UG4 719 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CCAR2Q8N163 923 aaKnown RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 AADATQ8N5Z0 425 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PNPLA1Q8N8W4 532 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ATP6V0D2Q8N8Y2 350 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SETD7Q8WTS6 366 aaKnown RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IGSF8Q969P0 613 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM131CQ96AQ9 280 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PPP1R13BQ96KQ4 1090 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM129BQ96TA1 746 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM204AQ9H8W3 233 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SIX2Q9NPC8 291 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DDIT4Q9NX09 232 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 AJAP1Q9UKB5 411 aaPredicted RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 APOBEC2Q9Y235 224 aaKnown RBP9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NCKAP1Q9Y2A7 1128 aa9.71□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TMEM131Q92545 1883 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 A0A1B0GVM2 712 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 A0A1W2PP55 124 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 A0A1W2PPC4 97 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TCAF2A6NFQ2 919 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VILLO15195 856 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PCDHGA12O60330 932 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ERBB2P04626 1255 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ABCB4P21439 1286 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MZF1P28698 734 aaPredicted RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CCR1P32246 355 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC8A1P32418 973 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 USP8P40818 1118 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CTSKP43235 329 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 STK19P49842 368 aaPredicted RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PLK1P53350 603 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ADPRHP54922 357 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RACK1P63244 317 aaKnown RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KCNJ12Q14500 433 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ELAVL3Q14576 367 aaKnown RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 EFHC1Q5JVL4 640 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RABGAP1LQ5R372 815 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OTUD1Q5VV17 481 aaPredicted RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RNF219Q5W0B1 726 aaPredicted RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DPY19L2P1Q6NXN4 242 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FBXL22Q6P050 247 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 NCEH1Q6PIU2 408 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CCNI2Q6ZMN8 369 aaPredicted RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM183BPQ6ZVS7 135 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC26A9Q7LBE3 791 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CIR1Q86X95 450 aaPredicted RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PASD1Q8IV76 773 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MMAAQ8IVH4 418 aaKnown RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DEFB106AQ8N104 65 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MLKLQ8NB16 471 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C1orf131Q8NDD1 294 aaKnown RBP9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 OR2T34Q8NGX1 318 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FRS2Q8WU20 508 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PTPRN2Q92932 1015 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ALG14Q96F25 216 aa9.7□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RPL10LQ96L21 214 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms