RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZNF813Q6ZN06 617 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 CATSPERGQ6ZRH7 1159 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 KRT28Q7Z3Y7 464 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 NECAB2Q7Z6G3 386 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 C4orf33Q8N1A6 199 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 FAM71DQ8N9W8 422 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 BBS1Q8NFJ9 593 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 NANOS1Q8WY41 292 aaKnown RBP5.47□□□□□ -1.53
PTPN4-203ENST00000430976 TP53INP1Q96A56 240 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 COPS7BQ9H9Q2 264 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-203ENST00000430976 PANK4Q9NVE7 773 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 CLEC5AQ9NY25 188 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 UBP1Q9NZI7 540 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 HCN2Q9UL51 889 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 DENND2AQ9ULE3 1009 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 LRRC42Q9Y546 428 aa5.47□□□□□ -1.53
PTPN4-203ENST00000430976 A8MUA0 341 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 ERAL1O75616 437 aaKnown RBP5.46□□□□□ -1.53
PTPN4-203ENST00000430976 PROS1P07225 676 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 ASGR2P07307 311 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 HDCP19113 662 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 CHRNA3P32297 505 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 P2RX3P56373 397 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 PER3P56645 1201 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 SMCO1Q147U7 214 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 PFKFB3Q16875 520 aaPredicted RBP5.46□□□□□ -1.53
PTPN4-203ENST00000430976 INTS6LQ5JSJ4 861 aaKnown RBP5.46□□□□□ -1.53
PTPN4-203ENST00000430976 LIN9Q5TKA1 542 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 PM20D1Q6GTS8 502 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 SLC25A24Q6NUK1 477 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 LMBR1LQ6UX01 489 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 DNAJC10Q8IXB1 793 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 ELMOD1Q8N336 334 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 FAM169BQ8N8A8 192 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 NEDD1Q8NHV4 660 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 SLC5A11Q8WWX8 675 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 TXN2Q99757 166 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 TMEM117Q9H0C3 514 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 BLZF1Q9H2G9 400 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 CUEDC2Q9H467 287 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 KLHL31Q9H511 634 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 CDHR5Q9HBB8 845 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 SLC35D1Q9NTN3 355 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 AGPAT5Q9NUQ2 364 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 ASIC3Q9UHC3 531 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF175Q9Y473 711 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 SLC22A7Q9Y694 548 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 CCNB3Q8WWL7 1395 aa5.46□□□□□ -1.53
PTPN4-203ENST00000430976 CENPBD1B2RD01 187 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 LINC01387J3KSC0 135 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 RNF103O00237 685 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PSMA7O14818 248 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 MGRN1O60291 552 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 SCGB2A1O75556 95 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TFRCP02786 760 aaKnown RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 RALBP11234 206 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 ICAM2P13598 275 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PSMA5P28066 241 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 NMT1P30419 496 aaKnown RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 IL6STP40189 918 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 GABRB2P47870 512 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TPTEP56180 551 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CCZ1BP86790 482 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CCZ1P86791 482 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 RPA4Q13156 261 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF460Q14592 562 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PTGISQ16647 500 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 DACT2Q5SW24 774 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PIK3R6Q5UE93 754 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 SLC36A4Q6YBV0 504 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TRMT11Q7Z4G4 463 aaKnown RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 COL23A1Q86Y22 540 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PM20D2Q8IYS1 436 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TMEM145Q8NBT3 493 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 DTX3LQ8TDB6 740 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 ADAMTS16Q8TE57 1224 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 STAMQ92783 540 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 LPPQ93052 612 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 FERMT1Q9BQL6 677 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TMEM246Q9BRR3 403 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 HINT2Q9BX68 163 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PINK1Q9BXM7 581 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 RSAD1Q9HA92 442 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 IMPAD1Q9NX62 359 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CABP1Q9NZU7 370 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PCDHA5Q9Y5H7 936 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PHLPP2Q6ZVD8 1323 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 NPHP3-ACAD11A0A0J9YXS1 232 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 A0A1B0GWJ7 208 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PMS2P1A4D2B8 440 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 EIF3DO15371 548 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 RNMTO43148 476 aaKnown RBP5.46□□□□□ -1.54
PTPN4-203ENST00000430976 FMO6PO60774 539 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 PRAMEF2O60811 474 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 CLN5O75503 358 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 TNNC2P02585 160 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 UGT1A1P22309 533 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 SERPINB5P36952 375 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 KCNJ1P48048 391 aa5.46□□□□□ -1.54
PTPN4-203ENST00000430976 HSF2Q03933 536 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms