RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ORC4O43929 436 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 NUAK1O60285 661 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 GFPT2O94808 682 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ELANEP08246 267 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 CYP3A4P08684 503 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 COMTP21964 271 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 MCCP23508 829 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ABCD3P28288 659 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ADORA2AP29274 412 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 RAP1GAPP47736 663 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 POLD2P49005 469 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 CCT4P50991 539 aaKnown RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 INHBEP58166 350 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 NXPH1P58417 271 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 RNASE9P60153 205 aaKnown RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SLC20A2Q08357 652 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SEMA3BQ13214 749 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 KRT32Q14532 448 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SEC23BQ15437 767 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SLC9C1Q4G0N8 1177 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ZNF484Q5JVG2 852 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 DEPDC1Q5TB30 811 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 FAM205BPQ63HN1 556 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 MTHFD1LQ6UB35 978 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 PPP1R42Q7Z4L9 355 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 MTERF4Q7Z6M4 381 aaKnown RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SGMS1Q86VZ5 419 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 CIR1Q86X95 450 aaPredicted RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ADSSL1Q8N142 457 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 OR8H2Q8N162 312 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 NGEFQ8N5V2 710 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SECISBP2LQ93073 1101 aaKnown RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 CDCA5Q96FF9 252 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
HMGB3-203ENST00000430118 HAPLN3Q96S86 360 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 SIN3AQ96ST3 1273 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 EYA3Q99504 573 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ZSWIM1Q9BR11 485 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 GLOD4Q9HC38 313 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 NKIRAS2Q9NYR9 191 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 TAS2R10Q9NYW0 307 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 TBC1D14Q9P2M4 693 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ATP6V0A2Q9Y487 856 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 NOX1Q9Y5S8 564 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ZNF609O15014 1411 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 XDHP47989 1333 aa4.45□□□□□ -1.7
HMGB3-203ENST00000430118 ABCC12Q96J65 1359 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 MANSC4A6NHS7 340 aaPredicted RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 GRXCR1A8MXD5 290 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 NPIPB6E9PJ23 425 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 TSPAN4O14817 238 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ZNF185O15231 689 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 KLK10O43240 276 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ANP32CO43423 234 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PROM1O43490 865 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 SGPL1O95470 568 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PLATP00750 562 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 CLEC3BP05452 202 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 CYP21A2P08686 494 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ACADMP11310 421 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PTMSP20962 102 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 DRD1P21728 446 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 MATN1P21941 496 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 THBS4P35443 961 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 BMPR1AP36894 532 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PBX1P40424 430 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 TERF1P54274 439 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 RPP30P78346 268 aaKnown RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 SETQ01105 290 aaPredicted RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 GALNT2Q10471 571 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 P3H1Q32P28 736 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 CD300EQ496F6 205 aaPredicted RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ZNF618Q5T7W0 954 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 DENND2CQ68D51 928 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 SLC9A4Q6AI14 798 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 OGFOD2Q6N063 350 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 B4GALNT4Q76KP1 1039 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ARMC9Q7Z3E5 817 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 R3HCC1LQ7Z5L2 792 aaKnown RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 CCDC105Q8IYK2 499 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 LSM14AQ8ND56 463 aaKnown RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 GLMPQ8WWB7 406 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 EDAQ92838 391 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 TMEM125Q96AQ2 219 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 APOPT1Q96IL0 206 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 GNRHR2Q96P88 292 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 BARD1Q99728 777 aaKnown RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 MECRQ9BV79 373 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ALG8Q9BVK2 526 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 TPSD1Q9BZJ3 242 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PLEKHA2Q9HB19 425 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 KRT84Q9NSB2 600 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 BEX4Q9NWD9 120 aaPredicted RBP4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PPP4R1LQ9P1A2 415 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 HSF4Q9ULV5 492 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 SORCS3Q9UPU3 1222 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 PCDHB7Q9Y5E2 793 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 ENTPD2Q9Y5L3 495 aa4.44□□□□□ -1.7
HMGB3-203ENST00000430118 TRGV11A0A075B6L2 103 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms