RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 AXLP30530 894 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 NTSP30990 170 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 RARRES1P49788 294 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 KCNT2Q6UVM3 1135 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 MYOCQ99972 504 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 SEMA6AQ9H2E6 1030 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 AASDHPPTQ9NRN7 309 aa15.65■□□□□ 0.1
PTPRF-206ENST00000429895 MRASO14807 208 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 TSPAN19P0C672 248 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 PTSQ03393 145 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 TSNQ15631 228 aaKnown RBP15.64■□□□□ 0.1
PTPRF-206ENST00000429895 NEDD8Q15843 81 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 BRSK2Q8IWQ3 736 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 FLCNQ8NFG4 579 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 MIEF2Q96C03 454 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 SENP8Q96LD8 212 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 KIAA1683Q9H0B3 1180 aa15.64■□□□□ 0.1
PTPRF-206ENST00000429895 A0A088AWK7 358 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 PHGDHO43175 533 aaKnown RBP15.64■□□□□ 0.09
PTPRF-206ENST00000429895 SLITRK3O94933 977 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF10P21506 573 aaPredicted RBP15.64■□□□□ 0.09
PTPRF-206ENST00000429895 S100A3P33764 101 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 HNF4AP41235 474 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 POLD2P49005 469 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 AGMOQ6ZNB7 445 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 STK32CQ86UX6 486 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF410Q86VK4 478 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 DENND1CQ8IV53 801 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 DSELQ8IZU8 1212 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 EFCAB3Q8N7B9 438 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 KLQ9UEF7 1012 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 INVSQ9Y283 1065 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 TRAV19A0A0A6YYK7 116 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ZBTB22O15209 634 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 TEX28O15482 410 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 RIPK2O43353 540 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF24P17028 368 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 SLC25A24Q6NUK1 477 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 POLR1EQ9GZS1 481 aaKnown RBP15.64■□□□□ 0.09
PTPRF-206ENST00000429895 STK39Q9UEW8 545 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 MROH7Q68CQ1 1323 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ETS1P14921 441 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 HSPA14Q0VDF9 509 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 WSCD1Q658N2 575 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 CHD1O14646 1710 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 PTGES3LE9PB15 166 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 CXCL11O14625 94 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 UBOX5O94941 541 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 PIK3R1P27986 724 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 CD86P42081 329 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ABL2P42684 1182 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 IL2P60568 153 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 KRR1Q13601 381 aaKnown RBP15.64■□□□□ 0.09
PTPRF-206ENST00000429895 MAPK11Q15759 364 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 SLC41A1Q8IVJ1 513 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 MARK4Q96L34 752 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ABCC13Q9NSE7 274 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF624Q9P2J8 865 aaPredicted RBP15.64■□□□□ 0.09
PTPRF-206ENST00000429895 CHKBQ9Y259 395 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 ANKRD6Q9Y2G4 727 aa15.64■□□□□ 0.09
PTPRF-206ENST00000429895 TBL1XO60907 577 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 CLPTM1O96005 669 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 HIST1H2ABP04908 130 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 LGALS2P05162 132 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 MIPP30301 263 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 NR2C2P49116 596 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 CXCL17Q6UXB2 119 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 HIST3H2AQ7L7L0 130 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF655Q8N720 491 aaPredicted RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 HIST1H2ACQ93077 130 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 FAM126AQ9BYI3 521 aaPredicted RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 LACRTQ9GZZ8 138 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 KCNQ5Q9NR82 932 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 MYO3AQ8NEV4 1616 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ANKRD63C9JTQ0 380 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ACKR2O00590 384 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 DNALI1O14645 258 aaPredicted RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 EPN2O95208 641 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ATP5C1P36542 298 aaKnown RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 NPNTQ6UXI9 565 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 CXorf40BQ96DE9 158 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 DNPEPQ9ULA0 475 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 CCDC189A1A4V9 331 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 WNT10BO00744 389 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 GLI1P08151 1106 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 EPORP19235 508 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 RBL1P28749 1068 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 SERPINH1P50454 418 aaKnown RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 COPZ1P61923 177 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ACSM2AQ08AH3 577 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ACSM2BQ68CK6 577 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 RBM23Q86U06 439 aaKnown RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 LZTR1Q8N653 840 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 KIAA0895Q8NCT3 520 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 COPS5Q92905 334 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 BDH2Q9BUT1 245 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 RAD21L1Q9H4I0 556 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 CENPXA8MT69 81 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 GPR1P46091 355 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 PRMT9Q6P2P2 845 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms