RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 KAZALD1Q96I82 304 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 FCRL4Q96PJ5 515 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 EFHD1Q9BUP0 239 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 ITPAQ9BY32 194 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC25A18Q9H1K4 315 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 SAP30LQ9HAJ7 183 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 KRT84Q9NSB2 600 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 TBX20Q9UMR3 447 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 NFU1Q9UMS0 254 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CAMK2AQ9UQM7 478 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 UBE2J1Q9Y385 318 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 PIAS3Q9Y6X2 628 aa3.26□□□□□ -1.89
HMGB1P9-201ENST00000429856 CYP2D7A0A087X1C5 515 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 LOC105369274A0A096LPK9 316 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 LOC102723532A0A0G2JNH3 316 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 GXYLT2A0PJZ3 443 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 AGAP5A6NIR3 686 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 PRAMEF2O60811 474 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZBED4O75132 1171 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 F9P00740 461 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 IGKV2-30P06310 120 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 PRR35P0CG20 571 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 GLULP15104 373 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 KELP23276 732 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 TACR3P29371 465 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 MPGP29372 298 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 HOXD13P35453 343 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 STAT1P42224 750 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 TERF1P54274 439 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 WDR5P61964 334 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 RAE1P78406 368 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 HSF1Q00613 529 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 CNGA3Q16281 694 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 CCNG2Q16589 344 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 PRICKLE4Q2TBC4 344 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 P3H1Q32P28 736 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 GLE1Q53GS7 698 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 CEP78Q5JTW2 689 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 SPECC1Q5M775 1068 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 MEX3CQ5U5Q3 659 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 MORN5Q5VZ52 161 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 DGAT2L7PQ6IED9 249 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC18B1Q6NT16 456 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC22A25Q6T423 547 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 KIAA1324Q6UXG2 1013 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 YTHDF3Q7Z739 585 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 TRABD2AQ86V40 505 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 OR4N4Q8N0Y3 316 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 OR52L2PQ8NGH6 319 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 OSR1Q8TAX0 266 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 WDR60Q8WVS4 1066 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 GLMPQ8WWB7 406 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 DDB2Q92466 427 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAR2Q96K12 515 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 TREX2Q9BQ50 279 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 NUDT16L1Q9BRJ7 211 aaKnown RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 PAAF1Q9BRP4 392 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 NUAK2Q9H093 628 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 PLSCR4Q9NRQ2 329 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 ABHD10Q9NUJ1 306 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 FBXO28Q9NVF7 368 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 NDUFAF4Q9P032 175 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 SEMA5BQ9P283 1151 aa3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 SIRT4Q9Y6E7 314 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P9-201ENST00000429856 PEX12O00623 359 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 TGFB1I1O43294 461 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 CTIFO43310 598 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 BCAR3O75815 825 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 SGPL1O95470 568 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 MBPP02686 304 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 TFRCP02786 760 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 DNTTP04053 509 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 LYL1P12980 280 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ACP5P13686 325 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 HARS2P49590 506 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 SSBP2P81877 361 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 GHRHRQ02643 423 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 SLC14A1Q13336 389 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ANKRD1Q15327 319 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 CTXN3Q4LDR2 81 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 MTX3Q5HYI7 312 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 FAM69AQ5T7M9 428 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ZNF626Q68DY1 528 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ACSM6Q6P461 480 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 C16orf89Q6UX73 402 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 TMTC3Q6ZXV5 915 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 BRINP3Q76B58 766 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 KRT27Q7Z3Y8 459 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 KRT77Q7Z794 578 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 PXKQ7Z7A4 578 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 LSM14AQ8ND56 463 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 CPT1BQ92523 772 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 CUL5Q93034 780 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 ELP4Q96EB1 424 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 PERPQ96FX8 193 aa3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 RBM17Q96I25 401 aaKnown RBP3.24□□□□□ -1.89
HMGB1P9-201ENST00000429856 APOPT1Q96IL0 206 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms