RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 GNA14O95837 355 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 CALCAP01258 141 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 CCR1P32246 355 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 STK19P49842 368 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 C19orf57Q0VDD7 668 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 BNIP3Q12983 259 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 SHBQ15464 509 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 MEA1Q16626 185 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 SETMARQ53H47 684 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 KLHL10Q6JEL2 608 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 SPATA20Q8TB22 786 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 SLC4A5Q9BY07 1137 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 FAM204AQ9H8W3 233 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 XPO7Q9UIA9 1087 aaKnown RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
HLA-F-219ENST00000429294 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
HLA-F-219ENST00000429294 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 E5RJQ4 531 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 WNT9AO14904 365 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 MAT2AP31153 395 aaKnown RBP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 EIF2S3P41091 472 aaKnown RBP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 PLK1P53350 603 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 PPP2CBP62714 309 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 PPP2CAP67775 309 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 E2F1Q01094 437 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 ZNF177Q13360 481 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 RTP5Q14D33 572 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 FBXL19Q6PCT2 694 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 TMEM110Q86TL2 294 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 ARHGEF19Q8IW93 802 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 LMO3Q8TAP4 145 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 ZNF606Q8WXB4 792 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 TSC1Q92574 1164 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 RPRD1AQ96P16 312 aaPredicted RBP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 CYTH4Q9UIA0 394 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 CLCA2Q9UQC9 943 aa13.5□□□□□ -0.25
HLA-F-219ENST00000429294 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.5□□□□□ -0.25
HLA-F-219ENST00000429294 SYNJ2BP-COX16A0A087WUM0 186 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 C10orf142B7Z368 130 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 PRAMEF26H0Y7S4 382 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 TK2O00142 265 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 ALOX15BO15296 676 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 THAP12O43422 761 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 PLRG1O43660 514 aaKnown RBP13.49□□□□□ -0.25
HLA-F-219ENST00000429294 RNGTTO60942 597 aaKnown RBP13.49□□□□□ -0.25
HLA-F-219ENST00000429294 RTN2O75298 545 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 AFPP02771 609 aaKnown RBP13.49□□□□□ -0.25
HLA-F-219ENST00000429294 GLI1P08151 1106 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 VAV1P15498 845 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 GLDCP23378 1020 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 GNA15P30679 374 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 DRD3P35462 400 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 ACTN2P35609 894 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
HLA-F-219ENST00000429294 SNX16P57768 344 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 DAB2P98082 770 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 KCNH2Q12809 1159 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 EFHC1Q5JVL4 640 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 ISM2Q6H9L7 571 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 DENND1BQ6P3S1 775 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 FOXR2Q6PJQ5 311 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 ENOSF1Q7L5Y1 443 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 TRIM69Q86WT6 500 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 FGF11Q92914 225 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 KLHDC7BQ96G42 594 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 CRELD1Q96HD1 420 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 PREBQ9HCU5 417 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
HLA-F-219ENST00000429294 DDIT4Q9NX09 232 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 COX16Q9P0S2 106 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 VPS28Q9UK41 221 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
HLA-F-219ENST00000429294 MCF2LO15068 1137 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 ATP9BO43861 1147 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 BNIP3LO60238 219 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 HSF2BPO75031 334 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 FGFR1OPO95684 399 aaKnown RBP13.48□□□□□ -0.25
HLA-F-219ENST00000429294 IGLV3-25P01717 112 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 ITPKBP27987 946 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 USP8P40818 1118 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 NUMBP49757 651 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 CLDN6P56747 220 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 CNTN1Q12860 1018 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 PDCLQ13371 301 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 ZNF211Q13398 564 aaPredicted RBP13.48□□□□□ -0.25
HLA-F-219ENST00000429294 DLG2Q15700 870 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 TTI2Q6NXR4 508 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 FBXL22Q6P050 247 aa13.48□□□□□ -0.25
HLA-F-219ENST00000429294 CIR1Q86X95 450 aaPredicted RBP13.48□□□□□ -0.25
HLA-F-219ENST00000429294 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 942.2 ms