RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CATSPERZQ9NTU4 200 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 TMEM39AQ9NV64 488 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 CORO2BQ9UQ03 480 aa13.01□□□□□ -0.33
LDB3-205ENST00000429277 ADCY6O43306 1168 aa13□□□□□ -0.33
LDB3-205ENST00000429277 PEX1O43933 1283 aa13□□□□□ -0.33
LDB3-205ENST00000429277 BCL10O95999 233 aa13□□□□□ -0.33
LDB3-205ENST00000429277 NFICP08651 508 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ANXA5P08758 320 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CES1P23141 567 aa13□□□□□ -0.33
LDB3-205ENST00000429277 TTKP33981 857 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ATP5C1P36542 298 aaKnown RBP13□□□□□ -0.33
LDB3-205ENST00000429277 TOP3AQ13472 1001 aaPredicted RBP13□□□□□ -0.33
LDB3-205ENST00000429277 CNGA2Q16280 664 aa13□□□□□ -0.33
LDB3-205ENST00000429277 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
LDB3-205ENST00000429277 TFAP2DQ7Z6R9 452 aa13□□□□□ -0.33
LDB3-205ENST00000429277 PSTKQ8IV42 348 aaKnown RBP13□□□□□ -0.33
LDB3-205ENST00000429277 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
LDB3-205ENST00000429277 SUSD6Q92537 303 aa13□□□□□ -0.33
LDB3-205ENST00000429277 RORBQ92753 470 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ZC3H13Q5T200 1668 aaKnown RBP13□□□□□ -0.33
LDB3-205ENST00000429277 ZSCAN5CA6NGD5 496 aaPredicted RBP13□□□□□ -0.33
LDB3-205ENST00000429277 PDE2AO00408 941 aaPredicted RBP13□□□□□ -0.33
LDB3-205ENST00000429277 BTN3A1O00481 513 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CLOCKO15516 846 aa13□□□□□ -0.33
LDB3-205ENST00000429277 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
LDB3-205ENST00000429277 COX10Q12887 443 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CRY1Q16526 586 aa13□□□□□ -0.33
LDB3-205ENST00000429277 MEA1Q16626 185 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ARHGEF19Q8IW93 802 aa13□□□□□ -0.33
LDB3-205ENST00000429277 SPATA5L1Q9BVQ7 753 aa13□□□□□ -0.33
LDB3-205ENST00000429277 VAV3Q9UKW4 847 aa13□□□□□ -0.33
LDB3-205ENST00000429277 LRCH1Q9Y2L9 728 aa13□□□□□ -0.33
LDB3-205ENST00000429277 PSMB9P28065 219 aa13□□□□□ -0.33
LDB3-205ENST00000429277 PEX6Q13608 980 aa13□□□□□ -0.33
LDB3-205ENST00000429277 BHLHB9Q6PI77 547 aa13□□□□□ -0.33
LDB3-205ENST00000429277 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
LDB3-205ENST00000429277 MTMR8Q96EF0 704 aa13□□□□□ -0.33
LDB3-205ENST00000429277 TRAPPC9Q96Q05 1148 aa13□□□□□ -0.33
LDB3-205ENST00000429277 GEMIN8Q9NWZ8 242 aaKnown RBP13□□□□□ -0.33
LDB3-205ENST00000429277 GNPTGQ9UJJ9 305 aa13□□□□□ -0.33
LDB3-205ENST00000429277 SNX6Q9UNH7 406 aa13□□□□□ -0.33
LDB3-205ENST00000429277 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
LDB3-205ENST00000429277 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
LDB3-205ENST00000429277 MYL12BO14950 172 aa13□□□□□ -0.33
LDB3-205ENST00000429277 INPP4BO15327 924 aa13□□□□□ -0.33
LDB3-205ENST00000429277 VAV1P15498 845 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CLCN5P51795 746 aa13□□□□□ -0.33
LDB3-205ENST00000429277 SNRPD1P62314 119 aaKnown RBP13□□□□□ -0.33
LDB3-205ENST00000429277 PSMC6P62333 389 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CYP20A1Q6UW02 462 aa13□□□□□ -0.33
LDB3-205ENST00000429277 SLC30A10Q6XR72 485 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ADHFE1Q8IWW8 467 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CLYBLQ8N0X4 340 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ETNPPLQ8TBG4 499 aa13□□□□□ -0.33
LDB3-205ENST00000429277 CENPTQ96BT3 561 aa13□□□□□ -0.33
LDB3-205ENST00000429277 MARCH2Q9P0N8 246 aa13□□□□□ -0.33
LDB3-205ENST00000429277 PRKAG3Q9UGI9 489 aa13□□□□□ -0.33
LDB3-205ENST00000429277 FBXO10Q9UK96 956 aa13□□□□□ -0.33
LDB3-205ENST00000429277 TNFSF13BQ9Y275 285 aa13□□□□□ -0.33
LDB3-205ENST00000429277 ARIH1Q9Y4X5 557 aaPredicted RBP13□□□□□ -0.33
LDB3-205ENST00000429277 A0A0A0MRY4 1105 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 HS6ST1O60243 411 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 RARAP10276 462 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 RPL21P46778 160 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 DPYSL3Q14195 570 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SNX30Q5VWJ9 437 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 IKBIPQ70UQ0 350 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ZDHHC13Q8IUH4 622 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FAM136AQ96C01 138 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 VMP1Q96GC9 406 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SPATA13Q96N96 652 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 HGH1Q9BTY7 390 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FTHL17Q9BXU8 183 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 TKTL2Q9H0I9 626 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 CLEC4MQ9H2X3 399 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 GDF3Q9NR23 364 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 CDH9Q9ULB4 789 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SCAF8Q9UPN6 1271 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 SRRM3A6NNA2 597 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 LBPP18428 481 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 RPL14P50914 215 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 ERVK-9P63128 1117 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 IKBKEQ14164 716 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 TAB1Q15750 504 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 INO80DQ53TQ3 878 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 NEPROQ6NW34 567 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 DEFB128Q7Z7B8 93 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 RIOX2Q8IUF8 465 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 OR8H2Q8N162 312 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FAIM2Q9BWQ8 316 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.99□□□□□ -0.33
LDB3-205ENST00000429277 CDHR5Q9HBB8 845 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 POLR1DQ9Y2S0 133 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FAM86B1E9PN63 330 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 NBNO60934 754 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms