RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RNF219Q5W0B1 726 aaPredicted RBP15.98■□□□□ 0.15
SEC13-210ENST00000428626 ZNF683Q8IZ20 524 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 RNF34Q969K3 372 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 NPY6RQ99463 290 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 FEM1AQ9BSK4 669 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 TMPRSS4Q9NRS4 437 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 FHOD1Q9Y613 1164 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 KNTC1P50748 2209 aa15.98■□□□□ 0.15
SEC13-210ENST00000428626 NBEAQ8NFP9 2946 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 A0A1B0GTQ1 180 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 LRRC72A6NJI9 287 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 M0QYT0 321 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 RNF103O00237 685 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 ATP9BO43861 1147 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 SLC2A3P11169 496 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 C5AR1P21730 350 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 CCT8P50990 548 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 CCR5P51681 352 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 ELAVL3Q14576 367 aaKnown RBP15.97■□□□□ 0.15
SEC13-210ENST00000428626 ALFQ53S48 1182 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 C2CD6Q53TS8 623 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 RABGAP1LQ5R372 815 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 TTC39BQ5VTQ0 682 aaPredicted RBP15.97■□□□□ 0.15
SEC13-210ENST00000428626 TRNP1Q6NT89 227 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 SND1Q7KZF4 910 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEC13-210ENST00000428626 ADAT2Q7Z6V5 191 aaKnown RBP15.97■□□□□ 0.15
SEC13-210ENST00000428626 PROSER1Q86XN7 944 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 GATAD2AQ86YP4 633 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 ZNF397Q8NF99 534 aaPredicted RBP15.97■□□□□ 0.15
SEC13-210ENST00000428626 OR14C36Q8NHC7 312 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 PSMB7Q99436 277 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 CDC6Q99741 560 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 NDST4Q9H3R1 872 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 CLSTN2Q9H4D0 955 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 ARHGAP20Q9P2F6 1191 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
SEC13-210ENST00000428626 CBX4O00257 560 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 LATO43561 262 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 RTN2O75298 545 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 ADH1BP00325 375 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 MT-CO1P00395 513 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 HOXB3P14651 431 aaPredicted RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 CDH5P33151 784 aaPredicted RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 NOS2P35228 1153 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 KRT9P35527 623 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 CXCR3P49682 368 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 SULT2A1Q06520 285 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 SUZ12Q15022 739 aaKnown RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 POM121L1PQ3SYA9 428 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 VWA3BQ502W6 1294 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 Q6ZVU0 165 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 TMPRSS7Q7RTY8 843 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 MDM1Q8TC05 714 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 NT5C3BQ969T7 300 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 SPAG5Q96R06 1193 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 TUBGCP2Q9BSJ2 902 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 NAA15Q9BXJ9 866 aaKnown RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 ACE2Q9BYF1 805 aaPredicted RBP15.96■□□□□ 0.15
SEC13-210ENST00000428626 SIK2Q9H0K1 926 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 ARHGEF38Q9NXL2 777 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 PPM1HQ9ULR3 514 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 TBC1D30Q9Y2I9 924 aa15.96■□□□□ 0.15
SEC13-210ENST00000428626 K7ERQ8 282 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 TNFSF14O43557 240 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 SNAP91O60641 907 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 CTSLP07711 333 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 CYP11B1P15538 503 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 CD38P28907 300 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 FLT3P36888 993 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 GRK6P43250 576 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 C21orf59P57076 290 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 RNASE9P60153 205 aaKnown RBP15.95■□□□□ 0.14
SEC13-210ENST00000428626 DLG2Q15700 870 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 AGBL4Q5VU57 503 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
SEC13-210ENST00000428626 XYLT1Q86Y38 959 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 NOX5Q96PH1 765 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 TBCBQ99426 244 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 ELF4Q99607 663 aaPredicted RBP15.95■□□□□ 0.14
SEC13-210ENST00000428626 TKTL2Q9H0I9 626 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 AASDHPPTQ9NRN7 309 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 SAMSN1Q9NSI8 373 aaKnown RBP15.95■□□□□ 0.14
SEC13-210ENST00000428626 ATRXP46100 2492 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 DOCK4Q8N1I0 1966 aa15.95■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3DA0A087WVF3 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3IA0A087WXS9 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3EA0A087X179 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3KA0A087X1G2 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 FAM149AA5PLN7 773 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3FA6NER0 549 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3LB9A6J9 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 CLDN11O75508 207 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 TBC1D3HP0C7X1 549 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 SRCP12931 536 aa15.94■□□□□ 0.14
SEC13-210ENST00000428626 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
SEC13-210ENST00000428626 MAT2AP31153 395 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms