RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ADORA2AP29274 412 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 ABCG1P45844 678 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 DPYSL2Q16555 572 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 SCARA3Q6AZY7 606 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 KCNMB4Q86W47 210 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 OR52K1Q8NGK4 314 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 P2RY11Q96G91 374 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 A0A087WXM4 84 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 H3BSA7 217 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 PSME3P61289 254 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 SP2Q02086 613 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 SFSWAPQ12872 951 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 TTLL12Q14166 644 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 PABPC1LQ4VXU2 614 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 ZNF554Q86TJ5 538 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 CLVS1Q8IUQ0 354 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 ERI1Q8IV48 349 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 NUP93Q8N1F7 819 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 ZNF786Q8N393 782 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 PADI4Q9UM07 663 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 ZNF487B1APH4 448 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 EEF2KO00418 725 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 MTSS1O43312 755 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 USP12O75317 370 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 VAPBO95292 243 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 ALOX15P16050 662 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 GOT1P17174 413 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 TMEM132BQ14DG7 1078 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 DGKDQ16760 1214 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 CES4AQ5XG92 561 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 GRAMD4Q6IC98 578 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 FSTL4Q6MZW2 842 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 PMF1Q6P1K2 205 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 PATL1Q86TB9 770 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 SHKBP1Q8TBC3 707 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 KCNN1Q92952 543 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 FAR2Q96K12 515 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 PKP2Q99959 881 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 CCDC68Q9H2F9 335 aa10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 EML4Q9HC35 981 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-204ENST00000428331 KCNK1O00180 336 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 HBP1O60381 514 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 SRP72O76094 671 aaKnown RBP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 CSPG5O95196 566 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 EDN1P05305 212 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 NIPAL4Q0D2K0 466 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 RAB6CQ53S08 254 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 DCAF6Q58WW2 860 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 ARL13AQ5H913 290 aaPredicted RBP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PSTKQ8IV42 348 aaKnown RBP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PCDH20Q8N6Y1 951 aaKnown RBP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 VPS39Q96JC1 886 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 SPATA33Q96N06 139 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 RAB6CQ9H0N0 254 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 SMARCAD1Q9H4L7 1026 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PRDM12Q9H4Q4 367 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 SIX4Q9UIU6 781 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 AURKCQ9UQB9 309 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 H6PDO95479 791 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 IL4RP24394 825 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PTPN9P43378 593 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PLOD1Q02809 727 aaPredicted RBP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 POU5F1BQ06416 359 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 NME3Q13232 169 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 HERC3Q15034 1050 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PPP1R26Q5T8A7 1209 aaPredicted RBP10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 C16orf87Q6PH81 154 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 SIX6OS1Q8N1H7 587 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 PCYOX1LQ8NBM8 494 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 CAB39LQ9H9S4 337 aa10.96□□□□□ -0.65
ATP2C1-204ENST00000428331 BCAS2O75934 225 aaPredicted RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 FARP2O94887 1054 aaPredicted RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 MAGEA3P43357 314 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 BCAT1P54687 386 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 INPP5AQ14642 412 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 AGKQ53H12 422 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 PPM1LQ5SGD2 360 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 RBM12BQ8IXT5 1001 aaKnown RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 BEST2Q8NFU1 509 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 CXorf38Q8TB03 319 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 WNK4Q96J92 1243 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 CLK4Q9HAZ1 481 aaKnown RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 MATN2O00339 956 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 VILLO15195 856 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 SEC24DO94855 1032 aaPredicted RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 SLC12A1Q13621 1099 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 TARBP2Q15633 366 aaKnown RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 NAPEPLDQ6IQ20 393 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 LAYNQ6UX15 382 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 RNF111Q6ZNA4 994 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 TTC30AQ86WT1 665 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 RNF34Q969K3 372 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 PIWIL1Q96J94 861 aaKnown RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 MARK4Q96L34 752 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 B3GNT5Q9BYG0 378 aa10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 ZNF214Q9UL59 606 aaPredicted RBP10.96□□□□□ -0.66
ATP2C1-204ENST00000428331 CCDC78A2IDD5 438 aa10.95□□□□□ -0.66
ATP2C1-204ENST00000428331 C1QAP02745 245 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms