RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CPXM1Q96SM3 734 aa17.93■□□□□ 0.46
DDR1-235ENST00000428153 AASDHPPTQ9NRN7 309 aa17.93■□□□□ 0.46
DDR1-235ENST00000428153 KIAA1468Q9P260 1216 aa17.93■□□□□ 0.46
DDR1-235ENST00000428153 DMTF1Q9Y222 760 aa17.93■□□□□ 0.46
DDR1-235ENST00000428153 URB1O60287 2271 aaKnown RBP17.93■□□□□ 0.46
DDR1-235ENST00000428153 ADAMTS20P59510 1910 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 MAGEC1O60732 1142 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 CLDN11O75508 207 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 PDGFRAP16234 1089 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 STK19P49842 368 aaPredicted RBP17.92■□□□□ 0.46
DDR1-235ENST00000428153 PTK2Q05397 1052 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 TAF5Q15542 800 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 NAPEPLDQ6IQ20 393 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 C11orf57Q6ZUT1 292 aaPredicted RBP17.92■□□□□ 0.46
DDR1-235ENST00000428153 PRPF39Q86UA1 669 aaKnown RBP17.92■□□□□ 0.46
DDR1-235ENST00000428153 MFSD2AQ8NA29 543 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 ZNF397Q8NF99 534 aaPredicted RBP17.92■□□□□ 0.46
DDR1-235ENST00000428153 MDM1Q8TC05 714 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 OR8D1Q8WZ84 308 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 RNF34Q969K3 372 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 SERAC1Q96JX3 654 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 CRACR2AQ9BSW2 395 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 ACP6Q9NPH0 428 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 SLC25A13Q9UJS0 675 aa17.92■□□□□ 0.46
DDR1-235ENST00000428153 C1QTNF3-AMACRE9PGA6 284 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 TLR4O00206 839 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 MCF2LO15068 1137 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 PLRG1O43660 514 aaKnown RBP17.91■□□□□ 0.46
DDR1-235ENST00000428153 ITGAVP06756 1048 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 SLC9A1P19634 815 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 NOS2P35228 1153 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 NXPH1P58417 271 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 AUHQ13825 339 aaKnown RBP17.91■□□□□ 0.46
DDR1-235ENST00000428153 ARHGAP44Q17R89 818 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 OLFML1Q6UWY5 402 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 TRIM69Q86WT6 500 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 C1orf131Q8NDD1 294 aaKnown RBP17.91■□□□□ 0.46
DDR1-235ENST00000428153 RPRD1AQ96P16 312 aaPredicted RBP17.91■□□□□ 0.46
DDR1-235ENST00000428153 FEM1AQ9BSK4 669 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D30Q9Y2I9 924 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 OR51B4Q9Y5P0 310 aa17.91■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3DA0A087WVF3 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3IA0A087WXS9 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3EA0A087X179 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3KA0A087X1G2 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3FA6NER0 549 aaPredicted RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 TRABD2BA6NFA1 517 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3LB9A6J9 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 ENC1O14682 589 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 RNGTTO60942 597 aaKnown RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 GADD45BO75293 160 aaPredicted RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 DAB1O75553 588 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3HP0C7X1 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 PON1P27169 355 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 EPHA8P29322 1005 aaPredicted RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 USP8P40818 1118 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 CDH4P55283 916 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 SLC6A3Q01959 620 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 CCDC15Q0P6D6 951 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 ZNF177Q13360 481 aaPredicted RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 ILKQ13418 452 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 SHBQ15464 509 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 BRMS1LQ5PSV4 323 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3GQ6DHY5 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3CQ6IPX1 549 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 GJB7Q6PEY0 223 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 TBC1D3Q8IZP1 549 aaPredicted RBP17.9■□□□□ 0.46
DDR1-235ENST00000428153 ARHGAP20Q9P2F6 1191 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 PPM1HQ9ULR3 514 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 HS3ST2Q9Y278 367 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 PAXBP1Q9Y5B6 917 aa17.9■□□□□ 0.46
DDR1-235ENST00000428153 GOLGA8CPA6NN73 597 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 LDOC1O95751 146 aaPredicted RBP17.89■□□□□ 0.45
DDR1-235ENST00000428153 KRT9P35527 623 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 HNF1BP35680 557 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 SCNN1AP37088 669 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 BPIFB4P59827 614 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 IL9RQ01113 521 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 DLG2Q15700 870 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 SFMBT2Q5VUG0 894 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 NEK5Q6P3R8 708 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.89■□□□□ 0.45
DDR1-235ENST00000428153 FAM183BPQ6ZVS7 135 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 CIR1Q86X95 450 aaPredicted RBP17.89■□□□□ 0.45
DDR1-235ENST00000428153 IRF2BP1Q8IU81 584 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 SH2D3CQ8N5H7 860 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 MLKLQ8NB16 471 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 PGAP3Q96FM1 320 aaPredicted RBP17.89■□□□□ 0.45
DDR1-235ENST00000428153 PREBQ9HCU5 417 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 VPS28Q9UK41 221 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 VANGL2Q9ULK5 521 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 FARP1Q9Y4F1 1045 aaPredicted RBP17.89■□□□□ 0.45
DDR1-235ENST00000428153 HS3ST4Q9Y661 456 aa17.89■□□□□ 0.45
DDR1-235ENST00000428153 ARID1BQ8NFD5 2236 aaPredicted RBP17.88■□□□□ 0.45
DDR1-235ENST00000428153 A0A087WV48 116 aa17.88■□□□□ 0.45
DDR1-235ENST00000428153 WNT9AO14904 365 aa17.88■□□□□ 0.45
DDR1-235ENST00000428153 RFPL3O75679 317 aa17.88■□□□□ 0.45
DDR1-235ENST00000428153 F9P00740 461 aa17.88■□□□□ 0.45
DDR1-235ENST00000428153 VAV1P15498 845 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms