RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 A1L4Q6 167 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 MYMKA6NI61 221 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 CCDC69A6NI79 296 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 E7EWF7 191 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 POC1B-GALNT4F8VUJ3 575 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 EYA2O00167 538 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 RNF113AO15541 343 aaKnown RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 NCK2O43639 380 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 FGF18O76093 207 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 SLU7O95391 586 aaKnown RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 SETSIPP0DME0 302 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 HSPD1P10809 573 aaKnown RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 CYP2A6P11509 494 aaPredicted RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 TNFSF4P23510 183 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 ATP5F1P24539 256 aaPredicted RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 CCKARP32238 428 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 PXNP49023 591 aaPredicted RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 EVCP57679 992 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 HSP90AB3PQ58FF7 597 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 C3orf38Q5JPI3 329 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 ARHGAP40Q5TG30 622 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 IZUMO3Q5VZ72 239 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 C1orf228Q6PIY5 440 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 SYNE3Q6ZMZ3 975 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 KRT28Q7Z3Y7 464 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 KRT222Q8N1A0 295 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 NME8Q8N427 588 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 GALNT4Q8N4A0 578 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 ANKRD42Q8N9B4 389 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 COQ8BQ96D53 544 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 R3HDM4Q96D70 268 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 TCEANC2Q96MN5 208 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 USP28Q96RU2 1077 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 ZNF518BQ9C0D4 1074 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 LUZP4Q9P127 313 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 NAP1L2Q9ULW6 460 aaPredicted RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 GABRQQ9UN88 632 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 SCAF8Q9UPN6 1271 aaKnown RBP5.5□□□□□ -1.53
LINC00458-202ENST00000427299 SNX13Q9Y5W8 968 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 MYH7BA7E2Y1 1941 aa5.5□□□□□ -1.53
LINC00458-202ENST00000427299 COL5A3P25940 1745 aaPredicted RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 A0A1W2PPC4 97 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 ERVV-2B6SEH9 535 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SPTLC2O15270 562 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 AP5Z1O43299 807 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 ZSCAN12O43309 604 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 PPP6R2O75170 966 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 USP1O94782 785 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 UNC5CO95185 931 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SMC2O95347 1197 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 FGBP02675 491 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SLC3A2P08195 630 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 CHRM5P08912 532 aaPredicted RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SKILP12757 684 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 HALP42357 657 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 STT3AP46977 705 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 KCNJ5P48544 419 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SLC11A2P49281 568 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 RCAN1P53805 252 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 LILRA4P59901 499 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 RPS16P62249 146 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 CCZ1BP86790 482 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 CCZ1P86791 482 aaPredicted RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 BTKQ06187 659 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SLC13A2Q13183 592 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 CCDC57Q2TAC2 916 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 FAM209BQ5JX69 171 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 RGS7BPQ6MZT1 257 aaPredicted RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 OLFM4Q6UX06 510 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 LAYNQ6UX15 382 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 KIF6Q6ZMV9 814 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 C11orf57Q6ZUT1 292 aaPredicted RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 IRF2BP2Q7Z5L9 587 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 MRPL10Q7Z7H8 261 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 DHX40Q8IX18 779 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 CCAR2Q8N163 923 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 C17orf53Q8N3J3 647 aaPredicted RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SNX18Q96RF0 628 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SDF4Q9BRK5 362 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 HERPUD2Q9BSE4 406 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 SACM1LQ9NTJ5 587 aa5.49□□□□□ -1.53
LINC00458-202ENST00000427299 TRMT13Q9NUP7 481 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 TNRC6CQ9HCJ0 1690 aaKnown RBP5.49□□□□□ -1.53
LINC00458-202ENST00000427299 CDHR2Q9BYE9 1310 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 BAZ2AQ9UIF9 1905 aaKnown RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 RTL9Q8NET4 1388 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 KLF18A0A0U1RQI7 1052 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 A0A1B0GUL7 405 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 POM121BA6NF01 834 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 FCHO1O14526 889 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 TBC1D4O60343 1298 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 NBNO60934 754 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 PDIA3P30101 505 aaKnown RBP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 RGS19P49795 217 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 METAP2P50579 478 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00458-202ENST00000427299 TPTEP56180 551 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 MYL5Q02045 173 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 LRMPQ12912 555 aa5.48□□□□□ -1.53
LINC00458-202ENST00000427299 CERKLQ49MI3 558 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms