RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 GATAD2AQ86YP4 633 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 CACTIN-AS1Q8N1I8 211 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 FRS2Q8WU20 508 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 HNRNPLLQ8WVV9 542 aaKnown RBP13.27□□□□□ -0.29
NELFE-203ENST00000426722 RNF34Q969K3 372 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 NOX5Q96PH1 765 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 FAM204AQ9H8W3 233 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 CYTH4Q9UIA0 394 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.29
NELFE-203ENST00000426722 MCF2LO15068 1137 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 URB1O60287 2271 aaKnown RBP13.26□□□□□ -0.29
NELFE-203ENST00000426722 CLDN11O75508 207 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 JUPP14923 745 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 STK19P49842 368 aaPredicted RBP13.26□□□□□ -0.29
NELFE-203ENST00000426722 KNTC1P50748 2209 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 STX17P56962 302 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 STAT4Q14765 748 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 C5orf22Q49AR2 442 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 SOWAHCQ53LP3 525 aaPredicted RBP13.26□□□□□ -0.29
NELFE-203ENST00000426722 CCDC157Q569K6 752 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 PRAMEF14Q5SWL7 426 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
NELFE-203ENST00000426722 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
NELFE-203ENST00000426722 FBXL22Q6P050 247 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 TRIM65Q6PJ69 517 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 TRIM69Q86WT6 500 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 TSC1Q92574 1164 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 NXPE2Q96DL1 559 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 ALG14Q96F25 216 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 PPP1R13BQ96KQ4 1090 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 RPRD1AQ96P16 312 aaPredicted RBP13.26□□□□□ -0.29
NELFE-203ENST00000426722 DDIT4Q9NX09 232 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 RRN3Q9NYV6 651 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 ARHGAP20Q9P2F6 1191 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 WDFY3Q8IZQ1 3526 aa13.26□□□□□ -0.29
NELFE-203ENST00000426722 MYLKQ15746 1914 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 GTPBP10A4D1E9 387 aaKnown RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 FAM149AA5PLN7 773 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 WNT9AO14904 365 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 ZNF18P17022 549 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 NOS2P35228 1153 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 ACADVLP49748 655 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 CDH4P55283 916 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 KRT83P78385 493 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 PTK2Q05397 1052 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 ZNF177Q13360 481 aaPredicted RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 AUHQ13825 339 aaKnown RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 ACCSLQ4AC99 568 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 SETMARQ53H47 684 aaPredicted RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 NEK5Q6P3R8 708 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 GBP6Q6ZN66 633 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 C11orf57Q6ZUT1 292 aaPredicted RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 ZDHHC17Q8IUH5 632 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 WDTC1Q8N5D0 677 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 EID2Q8N6I1 236 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 SHC3Q92529 594 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 FEM1AQ9BSK4 669 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 NRSN2Q9GZP1 204 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 PREBQ9HCU5 417 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 APEX2Q9UBZ4 518 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 PPM1HQ9ULR3 514 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 TBC1D30Q9Y2I9 924 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
NELFE-203ENST00000426722 DOCK9Q9BZ29 2069 aa13.25□□□□□ -0.29
NELFE-203ENST00000426722 PKD1L2Q7Z442 2459 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 ACACAQ13085 2346 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 BECN2A8MW95 431 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PRAMEF26H0Y7S4 382 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PLK4O00444 970 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
NELFE-203ENST00000426722 CKMT2P17540 419 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 USP8P40818 1118 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PPP2CBP62714 309 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PPP2CAP67775 309 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PITX1P78337 314 aaPredicted RBP13.24□□□□□ -0.29
NELFE-203ENST00000426722 BNIP3Q12983 259 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 TAF5Q15542 800 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 DLG2Q15700 870 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 ARHGAP44Q17R89 818 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 OR6B2Q6IFH4 312 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 KANSL1Q7Z3B3 1105 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 SH2D3CQ8N5H7 860 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
NELFE-203ENST00000426722 ZNF397Q8NF99 534 aaPredicted RBP13.24□□□□□ -0.29
NELFE-203ENST00000426722 FAM174AQ8TBP5 190 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 PIP4K2CQ8TBX8 421 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 CCDC114Q96M63 670 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 CPXM1Q96SM3 734 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 RWDD2AQ9UIY3 292 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 VANGL2Q9ULK5 521 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 OR51B4Q9Y5P0 310 aa13.24□□□□□ -0.29
NELFE-203ENST00000426722 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
NELFE-203ENST00000426722 BIN1O00499 593 aa13.23□□□□□ -0.29
NELFE-203ENST00000426722 RTN2O75298 545 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms