RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 VIPR2P41587 438 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 CASP4P49662 377 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 AP3M2P53677 418 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 MYL6P60660 151 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 RPL10AP62906 217 aaKnown RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 GUCY1A3Q02108 690 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 EGR3Q06889 387 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ADAM9Q13443 819 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 BIRC3Q13489 604 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 KCNB1Q14721 858 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 VEPH1Q14D04 833 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 WDR72Q3MJ13 1102 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ARHGAP15Q53QZ3 475 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 FAM171BQ6P995 826 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 CYP2R1Q6VVX0 501 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 UBE2R2Q712K3 238 aaPredicted RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 GAREM2Q75VX8 874 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 LIMS2Q7Z4I7 341 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 TMC8Q8IU68 726 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 SPATA2LQ8IUW3 424 aaPredicted RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 MFSD6LQ8IWD5 586 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 SCN4BQ8IWT1 228 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ADGRF2Q8IZF7 708 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 OR6B3Q8NGW1 331 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ZSCAN18Q8TBC5 510 aaPredicted RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 PLEKHO2Q8TD55 490 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 PARD3BQ8TEW8 1205 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 TMEM174Q8WUU8 243 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 GAB3Q8WWW8 586 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 E2F7Q96AV8 911 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 TRMT61BQ9BVS5 477 aaKnown RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 CDADC1Q9BWV3 514 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 SNX25Q9H3E2 840 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 SLITRK6Q9H5Y7 841 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ZNF334Q9HCZ1 680 aaPredicted RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 MAGED2Q9UNF1 606 aaPredicted RBP6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 TRAF3IP3Q9Y228 551 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 FRMD4BQ9Y2L6 1034 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 ATP8A1Q9Y2Q0 1164 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 PCDHA9Q9Y5H5 950 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 LAMA1P25391 3075 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 CFAP46Q8IYW2 2715 aa6.55□□□□□ -1.36
NIF3L1-207ENST00000426253 PDCD11Q14690 1871 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 A0A087WV48 116 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 LRRIQ3A6PVS8 624 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 HEPACAM2A8MVW5 462 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 IKBKBO14920 756 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 ZNF263O14978 683 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 HCRTO43612 131 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TACC1O75410 805 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 IGHA1P01876 353 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 ATF6P18850 670 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 FCARP24071 287 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 RPL13P26373 211 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 GDI1P31150 447 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 GRIK1P39086 918 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 PXNP49023 591 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 GPR15P49685 360 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 CSRP3P50461 194 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 CDH8P55286 799 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TNNC1P63316 161 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 DLG4P78352 724 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 NFKB2Q00653 900 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 PNOCQ13519 176 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 SGSM1Q2NKQ1 1148 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TAF1BQ53T94 588 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 CT47A1Q5JQC4 288 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 GPR158Q5T848 1215 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 HLA-DQA1Q5Y7H0 255 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 ARID3BQ8IVW6 561 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 YAF2Q8IY57 180 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 GUF1Q8N442 669 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 SPEM1Q8N4L4 309 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 RCBTB1Q8NDN9 531 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TMEM52Q8NDY8 209 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 ENGASEQ8NFI3 743 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 KBTBD7Q8WVZ9 684 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 FAM3CQ92520 227 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 SYAP1Q96A49 352 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TIGD1Q96MW7 591 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 GCNAQ96QF7 691 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 PKMYT1Q99640 499 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 MRPL45Q9BRJ2 306 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 ORAI3Q9BRQ5 295 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 SLC46A2Q9BY10 475 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TASP1Q9H6P5 420 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 TRPV4Q9HBA0 871 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 CDH9Q9ULB4 789 aa6.54□□□□□ -1.36
NIF3L1-207ENST00000426253 SPAG17Q6Q759 2223 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 SLC38A8A6NNN8 435 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 A8MXQ7 604 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 B8ZZF3 427 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 CDX4O14627 284 aaPredicted RBP6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 MAPK13O15264 365 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 SMC2O95347 1197 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 CSH1P0DML2 217 aa6.53□□□□□ -1.36
NIF3L1-207ENST00000426253 CSH2P0DML3 217 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms