RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SNAP91O60641 907 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 SRGAP2O75044 1071 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 DNTTP04053 509 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 RHOCP08134 193 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 CCDC172P0C7W6 258 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 RRM1P23921 792 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 ADRA1BP35368 520 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 PRKCIP41743 596 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 DPP6P42658 865 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 RPL7AP62424 266 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 SULT2A1Q06520 285 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 ASIC2Q16515 512 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 DUOXA1Q1HG43 343 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 FAM72AQ5TYM5 149 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 DCAF12L1Q5VU92 463 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 FAM72DQ6L9T8 149 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 TFAP2DQ7Z6R9 452 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 FAM72BQ86X60 149 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 STK40Q8N2I9 435 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 CCDC185Q8N715 623 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 CADM4Q8NFZ8 388 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 FAM172AQ8WUF8 416 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 FOXJ1Q92949 421 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 PABPC3Q9H361 631 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 HAUS4Q9H6D7 363 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 C6orf106Q9H6K1 298 aaPredicted RBP18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 VPS28Q9UK41 221 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 SLCO1B1Q9Y6L6 691 aa18.32■□□□□ 0.52
SBDSP1-202ENST00000423945 CCP110O43303 1012 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 ATP9BO43861 1147 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 ENGP17813 658 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 PTMSP20962 102 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 TNFAIP3P21580 790 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 GPD1P21695 349 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 OGDHQ02218 1023 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 NRG1Q02297 640 aaPredicted RBP18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 CST6Q15828 149 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 FIGNQ5HY92 759 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 ACBD5Q5T8D3 534 aaPredicted RBP18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 DNAJC24Q6P3W2 148 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 LRRC31Q6UY01 552 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 SETD3Q86TU7 594 aaPredicted RBP18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 C1orf216Q8TAB5 229 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 EDEM3Q9BZQ6 932 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 SLC6A14Q9UN76 642 aa18.31■□□□□ 0.52
SBDSP1-202ENST00000423945 C10orf142B7Z368 130 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 DDX3XO00571 662 aaKnown RBP eCLIP18.3■□□□□ 0.527e-7■■■■■ 30.5
SBDSP1-202ENST00000423945 MID1O15344 667 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 MT-CO1P00395 513 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 CFIP05156 583 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 SERPINF2P08697 491 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 SKILP12757 684 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 GLDCP23378 1020 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 METAP1P53582 386 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 SFMBT2Q5VUG0 894 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 MMAAQ8IVH4 418 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 RGL4Q8IZJ4 473 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 SH2D3CQ8N5H7 860 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 OR7D4Q8NG98 312 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 CEP76Q8TAP6 659 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 NUSAP1Q9BXS6 441 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 ZYG11BQ9C0D3 744 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 MUC3BQ9H195 1237 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 OSBPL2Q9H1P3 480 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 TMEM9BQ9NQ34 198 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 NDFIP2Q9NV92 336 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 PPARGC1AQ9UBK2 798 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 OR12D3Q9UGF7 316 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 VPS51Q9UID3 782 aa18.3■□□□□ 0.52
SBDSP1-202ENST00000423945 PLXNA2O75051 1894 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 MEI4A8MW99 385 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 TMCO5BA8MYB1 307 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 ATMINO43313 823 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 SRCP12931 536 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 ZNF143P52747 638 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 UBASH3AP57075 661 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 DLG2Q15700 870 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 TTC31Q49AM3 519 aaPredicted RBP18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 WDR45BQ5MNZ6 344 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 SYCP2LQ5T4T6 812 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 HGSNATQ68CP4 663 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 IL31Q6EBC2 164 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 USP30Q70CQ3 517 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 NLRP14Q86W24 1093 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 AADATQ8N5Z0 425 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 OR2I1PQ8NGU4 316 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 NTAN1Q96AB6 310 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 BTBD1Q9H0C5 482 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 PCED1AQ9H1Q7 454 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 FBXL12Q9NXK8 326 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 SLC25A13Q9UJS0 675 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 SCML1Q9UN30 329 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 HS3ST2Q9Y278 367 aa18.29■□□□□ 0.52
SBDSP1-202ENST00000423945 A0A1W2PP55 124 aa18.28■□□□□ 0.52
SBDSP1-202ENST00000423945 K7ERQ8 282 aa18.28■□□□□ 0.52
SBDSP1-202ENST00000423945 SMAD6O43541 496 aaKnown RBP18.28■□□□□ 0.52
SBDSP1-202ENST00000423945 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
SBDSP1-202ENST00000423945 LRIG2O94898 1065 aa18.28■□□□□ 0.52
SBDSP1-202ENST00000423945 SEMA4FO95754 770 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms