RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RRN3Q9NYV6 651 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 IGF2RP11717 2491 aa15.63■□□□□ 0.09
USB1-202ENST00000423271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 FAM47DPA6NHR8 397 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 SH3BP5O60239 455 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 RNASEH1O60930 286 aaKnown RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 RNASEH2AO75792 299 aaKnown RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 SERPINC1P01008 464 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 IGHV4-34P06331 123 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 CHRNB2P17787 502 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 METAP1P53582 386 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 JAM2P57087 298 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 SIM1P81133 766 aaPredicted RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 FANCCQ00597 558 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 FMO1Q01740 532 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 DEUP1Q05D60 604 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 ZNF177Q13360 481 aaPredicted RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 C5orf22Q49AR2 442 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 ALFQ53S48 1182 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 BRMS1LQ5PSV4 323 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 ZNF683Q8IZ20 524 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 AADATQ8N5Z0 425 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 FRS2Q8WU20 508 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 PGAP3Q96FM1 320 aaPredicted RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 ERGIC2Q96RQ1 377 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 FEM1AQ9BSK4 669 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 NEUROG2Q9H2A3 272 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 WDCPQ9H6R7 721 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 GAREM1Q9H706 876 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 TM9SF3Q9HD45 589 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 TMEM59LQ9UK28 342 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 SCML1Q9UN30 329 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 NCKAP1Q9Y2A7 1128 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 FNDC3AQ9Y2H6 1198 aaKnown RBP15.62■□□□□ 0.09
USB1-202ENST00000423271 OR51B4Q9Y5P0 310 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 PLXNA2O75051 1894 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 TMEM131Q92545 1883 aa15.62■□□□□ 0.09
USB1-202ENST00000423271 AKAP13Q12802 2813 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 A0A1B0GTH6 734 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 CLDN11O75508 207 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 SLC8A1P32418 973 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 SOX5P35711 763 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 AFF3P51826 1226 aaKnown RBP15.61■□□□□ 0.09
USB1-202ENST00000423271 GALCP54803 685 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 CDH4P55283 916 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 CDR2Q01850 454 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 SULT2A1Q06520 285 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 MTA1Q13330 715 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 SLC25A52Q3SY17 297 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 FILIP1LQ4L180 1135 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 ARTNQ5T4W7 220 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 KIAA0895LQ68EN5 471 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 NCEH1Q6PIU2 408 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 SND1Q7KZF4 910 aaKnown RBP eCLIP15.61■□□□□ 0.09
USB1-202ENST00000423271 PHLDB2Q86SQ0 1253 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 NAXDQ8IW45 347 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 EMC1Q8N766 993 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 RNF214Q8ND24 703 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 PCMTD1Q96MG8 357 aaPredicted RBP15.61■□□□□ 0.09
USB1-202ENST00000423271 CFAP57Q96MR6 1250 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 OMDQ99983 421 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 METTL5Q9NRN9 209 aaKnown RBP15.61■□□□□ 0.09
USB1-202ENST00000423271 VPS28Q9UK41 221 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 TBC1D30Q9Y2I9 924 aa15.61■□□□□ 0.09
USB1-202ENST00000423271 TP53BP1Q12888 1972 aaPredicted RBP15.6■□□□□ 0.09
USB1-202ENST00000423271 PLK4O00444 970 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 CER1O95813 267 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 CYP1A1P04798 512 aaPredicted RBP15.6■□□□□ 0.09
USB1-202ENST00000423271 CD27P26842 260 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 NNMTP40261 264 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 OXCT1P55809 520 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 SLC14A1Q13336 389 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 ELAVL3Q14576 367 aaKnown RBP15.6■□□□□ 0.09
USB1-202ENST00000423271 ST3GAL2Q16842 350 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 KIF19Q2TAC6 998 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 HLA-BQ31612 363 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 RAB6CQ53S08 254 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 BNIPLQ7Z465 357 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 FAM131BQ86XD5 332 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 ZNF677Q86XU0 584 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 PSMB7Q99436 277 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 RAB6CQ9H0N0 254 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 MUC3BQ9H195 1237 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 EBF2Q9HAK2 575 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 OSGEPQ9NPF4 335 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 MPP6Q9NZW5 540 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 ADAMTS1Q9UHI8 967 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 SLC25A13Q9UJS0 675 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 FZD4Q9ULV1 537 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 SNX11Q9Y5W9 270 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 DOCK4Q8N1I0 1966 aa15.6■□□□□ 0.09
USB1-202ENST00000423271 WDFY3Q8IZQ1 3526 aa15.59■□□□□ 0.09
USB1-202ENST00000423271 C10orf142B7Z368 130 aa15.59■□□□□ 0.09
USB1-202ENST00000423271 HYAL3O43820 417 aaPredicted RBP15.59■□□□□ 0.09
USB1-202ENST00000423271 ATP9BO43861 1147 aa15.59■□□□□ 0.09
USB1-202ENST00000423271 SNAP91O60641 907 aa15.59■□□□□ 0.09
USB1-202ENST00000423271 GJB6O95452 261 aa15.59■□□□□ 0.09
USB1-202ENST00000423271 ADH1BP00325 375 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms