RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 MED28Q9H204 178 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 NGRNQ9NPE2 291 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 GSTK1Q9Y2Q3 226 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 SNX8Q9Y5X2 465 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 PHRF1Q9P1Y6 1649 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 DNAJB5O75953 348 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 DHFRP00374 187 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 SNRPB2P08579 225 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 CYP11B1P15538 503 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 TUBP50607 506 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 GTF2IP78347 998 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 TGFBIQ15582 683 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 C16orf46Q6P387 395 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 SHQ1Q6PI26 577 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ZBTB46Q86UZ6 589 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 KATNAL2Q8IYT4 538 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 LRRC47Q8N1G4 583 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ATG16L2Q8NAA4 619 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF486Q96H40 463 aaPredicted RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 RGS17Q9UGC6 210 aaPredicted RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 MTF2Q9Y483 593 aaPredicted RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 KCNE2Q9Y6J6 123 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 FANCGO15287 622 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 TBX1O43435 398 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ORC5O43913 435 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 PLOD3O60568 738 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ADAMTS2O95450 1211 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 TIE1P35590 1138 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 HTR2BP41595 481 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 SESN2P58004 480 aaPredicted RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 RPL10AP62906 217 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 OGFOD2Q6N063 350 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ERGIC3Q9Y282 383 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 PSME3P61289 254 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 CARTPTQ16568 116 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 THAP5Q7Z6K1 395 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 GALNT7Q86SF2 657 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 SNTG2Q9NY99 539 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 TSPAN19P0C672 248 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 HMGB2P26583 209 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 CAPGP40121 348 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 ELK3P41970 407 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 STT3AP46977 705 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 CLPPQ16740 277 aaPredicted RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 INO80DQ53TQ3 878 aaPredicted RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 DMRTB1Q96MA1 342 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 THUMPD3Q9BV44 507 aaKnown RBP6.57□□□□□ -1.36
SBNO1-202ENST00000420886 MST1RQ04912 1400 aa6.57□□□□□ -1.36
SBNO1-202ENST00000420886 CHADO15335 359 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 SYNCRIPO60506 623 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 UMPSP11172 480 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 STAT5AP42229 794 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 GABRB2P47870 512 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 STAT5BP51692 787 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 LSM3P62310 102 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF45Q02386 682 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 DGKKQ5KSL6 1271 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF767PQ75MW2 155 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 LINC00523Q86TU6 105 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 KATNAL1Q9BW62 490 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 WDR6Q9NNW5 1121 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF624Q9P2J8 865 aaPredicted RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 SULT1B1O43704 296 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ERP29P30040 261 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 SDC4P31431 198 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 AP3M2P53677 418 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 CIAPIN1Q6FI81 312 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 VCPIP1Q96JH7 1222 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 MTMR9Q96QG7 549 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 GTPBP2Q9BX10 602 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 SF3B1O75533 1304 aaKnown RBP eCLIP6.56□□□□□ -1.361e-6■■■■□ 22.8
SBNO1-202ENST00000420886 FADS2P1A8MWK0 482 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZW10O43264 779 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 EXTL3O43909 919 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 UGT2B11O75310 529 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 IL7P13232 177 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 CRHR1P34998 444 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 NSUN2Q08J23 767 aaKnown RBP eCLIP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF267Q14586 743 aaPredicted RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZSWIM7Q19AV6 140 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ANGEL2Q5VTE6 544 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 USP17L2Q6R6M4 530 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 POLNQ7Z5Q5 900 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 DCP2Q8IU60 420 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 CAMKK1Q8N5S9 505 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ASB12Q8WXK4 309 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 NODALQ96S42 347 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 RTFDC1Q9BY42 306 aaPredicted RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 GLRA2P23416 452 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ATP6V1E1P36543 226 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 MPP1Q00013 466 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 SFT2D3Q587I9 215 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 FAXCQ5TGI0 409 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF605Q86T29 641 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 CENPNQ96H22 339 aaPredicted RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 INTS10Q9NVR2 710 aaKnown RBP6.56□□□□□ -1.36
SBNO1-202ENST00000420886 MRASO14807 208 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 RRM1P23921 792 aa6.56□□□□□ -1.36
SBNO1-202ENST00000420886 ZNF699Q32M78 642 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms