RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 SALL4Q9UJQ4 1053 aa21.17■□□□□ 0.98
HMGXB4-203ENST00000420166 WDFY4Q6ZS81 3184 aa21.17■□□□□ 0.98
HMGXB4-203ENST00000420166 A0A1W2PQF6 199 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 H3BRJ5 948 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 BUB1BO60566 1050 aaPredicted RBP21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 APBB3O95704 486 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 SRPRAP08240 638 aaKnown RBP21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 ETFBP38117 255 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 SLC1A1P43005 524 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 HCAR3P49019 387 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 PTPN5P54829 565 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 GSE1Q14687 1217 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 TXLNBQ8N3L3 684 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 CAMKK1Q8N5S9 505 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 KDM1BQ8NB78 822 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 NELL1Q92832 810 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 C2orf49Q9BVC5 232 aaPredicted RBP21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 FAM126AQ9BYI3 521 aaPredicted RBP21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 PCDH18Q9HCL0 1135 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 CD248Q9HCU0 757 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 POLMQ9NP87 494 aaPredicted RBP21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 RAD54BQ9Y620 910 aa21.16■□□□□ 0.98
HMGXB4-203ENST00000420166 SNAP91O60641 907 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 KRT7P08729 469 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 ARL4AP40617 200 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 NRLP54845 237 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 ST8SIA6P61647 398 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 CCZ1BP86790 482 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 CCZ1P86791 482 aaPredicted RBP21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 DPYSQ14117 519 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 ATP13A4Q4VNC1 1196 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 KIAA1211LQ6NV74 962 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 POLNQ7Z5Q5 900 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 FAM71BQ8TC56 605 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 MAGEH1Q9H213 219 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 NOL6Q9H6R4 1146 aaKnown RBP21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 DONSONQ9NYP3 566 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 RAPGEFL1Q9UHV5 662 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 VPS51Q9UID3 782 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 DUSP10Q9Y6W6 482 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 EML5Q05BV3 1969 aa21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 NYNRINQ9P2P1 1898 aaKnown RBP21.15■□□□□ 0.98
HMGXB4-203ENST00000420166 TCRBV21S2A2A0A5A6 115 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 DAPK3O43293 454 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 RAMP2O60895 175 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 EPHX1P07099 455 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 HLA-EP13747 358 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 ERCC2P18074 760 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 COMTP21964 271 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 STK19P49842 368 aaPredicted RBP21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 ARSEP51690 589 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 CDH6P55285 790 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 DMWDQ09019 674 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 KRT81Q14533 505 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 STARD3Q14849 445 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 HEATR6Q6AI08 1181 aaKnown RBP21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 C11orf63Q6NUN7 778 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 UMODL1-AS1Q8N2C9 162 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 TPCN2Q8NHX9 752 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 TSC1Q92574 1164 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 CALR3Q96L12 384 aaKnown RBP21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 RPL10LQ96L21 214 aaKnown RBP21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 CSPG4P5Q96PW8 444 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 SPON2Q9BUD6 331 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 IRF2BPLQ9H1B7 796 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 ATP13A1Q9HD20 1204 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 RCOR3Q9P2K3 495 aaPredicted RBP21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 SLC25A13Q9UJS0 675 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 HYOU1Q9Y4L1 999 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 ADGRG1Q9Y653 693 aa21.14■□□□□ 0.97
HMGXB4-203ENST00000420166 BUB1O43683 1085 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 SPOPO43791 374 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 NRDCO43847 1150 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 SYNCRIPO60506 623 aaKnown RBP21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ALDH1A2O94788 518 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ACVRL1P37023 503 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 PXNP49023 591 aaPredicted RBP21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 FNTBP49356 437 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 VASPP50552 380 aaPredicted RBP21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 KIF5AQ12840 1032 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 POLD3Q15054 466 aaPredicted RBP21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 LRRC38Q5VT99 294 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ANO7Q6IWH7 933 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 RASSF3Q86WH2 238 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ZNF366Q8N895 744 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ARHGEF2Q92974 986 aaKnown RBP21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ERLEC1Q96DZ1 483 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ACE2Q9BYF1 805 aaPredicted RBP21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 GOLPH3Q9H4A6 298 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 KLHL11Q9NVR0 708 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ZSCAN32Q9NX65 697 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 EBF1Q9UH73 591 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 SLCO3A1Q9UIG8 710 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 ALG6Q9Y672 507 aa21.13■□□□□ 0.97
HMGXB4-203ENST00000420166 CCDC163A0A0D9SF12 145 aa21.12■□□□□ 0.97
HMGXB4-203ENST00000420166 A0A0U1RQJ8 604 aa21.12■□□□□ 0.97
HMGXB4-203ENST00000420166 CBX4O00257 560 aa21.12■□□□□ 0.97
HMGXB4-203ENST00000420166 ZMPSTE24O75844 475 aa21.12■□□□□ 0.97
HMGXB4-203ENST00000420166 CD48P09326 243 aa21.12■□□□□ 0.97
HMGXB4-203ENST00000420166 GLDCP23378 1020 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms