RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 IPO7O95373 1038 aaKnown RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 LARGE1O95461 756 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 SGPL1O95470 568 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 TOMM40O96008 361 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 PLAUP00749 431 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 MBPP02686 304 aaPredicted RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ALDOAP04075 364 aaKnown RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ENO1P06733 434 aaKnown RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ALADP13716 330 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 AKR1A1P14550 325 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 TFEBP19484 476 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 THBS4P35443 961 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 HOXD12P35452 270 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 MTA1Q13330 715 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 STIM1Q13586 685 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 BLMHQ13867 455 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 PTK2BQ14289 1009 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 PUM3Q15397 648 aaKnown RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 KRTAP27-1Q3LI81 207 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZACNQ401N2 412 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 JAKMIP3Q5VZ66 844 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 MSANTD2Q6P1R3 559 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF549Q6P9A3 640 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 DEF8Q6ZN54 512 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 KRBA2Q6ZNG9 492 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 UBE2Q1Q7Z7E8 422 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 EFCAB13Q8IY85 973 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 LAS2Q8IYD9 372 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ENAHQ8N8S7 591 aaPredicted RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 SLC22A17Q8WUG5 538 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ASB12Q8WXK4 309 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 EID2BQ96D98 161 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 C18orf8Q96DM3 657 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 REXO5Q96IC2 774 aaKnown RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF845Q96IR2 970 aaPredicted RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 CAMK1GQ96NX5 476 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 FCRL5Q96RD9 977 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 PRDM16Q9HAZ2 1276 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 KCNK9Q9NPC2 374 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 OBP2BQ9NPH6 170 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 IGSF9Q9P2J2 1179 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 HEY2Q9UBP5 337 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 DAAM1Q9Y4D1 1078 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 LRRFIP2Q9Y608 721 aaKnown RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 COMMD10Q9Y6G5 202 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 TOP2BQ02880 1626 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ELP1O95163 1332 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 SPATA31A5Q5VU36 1347 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 EMSYQ7Z589 1322 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 SPATA31A7Q8IWB4 1347 aa3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF335Q9H4Z2 1342 aaPredicted RBP3.69□□□□□ -1.82
SDCBPP3-201ENST00000419629 SAMD9Q5K651 1589 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 MBD5Q9P267 1494 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CCDC189A1A4V9 331 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SYCE3A1L190 88 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 PRSS44E7EML9 344 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SYT5O00445 386 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 NKX2-8O15522 239 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 DHHO43323 396 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 NEMFO60524 1076 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SMC2O95347 1197 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CER1O95813 267 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SYF2O95926 243 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 IGHDP01880 384 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 RPS6KB1P23443 525 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SERPINB3P29508 390 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 GRK5P34947 590 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 IL6STP40189 918 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CPA2P48052 419 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 AGTR2P50052 363 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 RHBDL3P58872 404 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 YPEL5P62699 121 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 TLE3Q04726 772 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 BIRC2Q13490 618 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 WDR43Q15061 677 aaKnown RBP eCLIP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 PDCD2Q16342 344 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 PFKFB4Q16877 469 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 TBRG1Q3YBR2 411 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 UBAP2Q5T6F2 1119 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ANKRD40Q6AI12 368 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 TTLL5Q6EMB2 1281 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 GGT6Q6P531 493 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 TMEM88Q6PEY1 159 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 KYAT3Q6YP21 454 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ERC1Q8IUD2 1116 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 SPICE1Q8N0Z3 855 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 FAM47BQ8NA70 645 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZBTB8BQ8NAP8 495 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ZNF548Q8NEK5 533 aaPredicted RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 NPIPB3Q92617 1050 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CELF1Q92879 486 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 EXOC4Q96A65 974 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 P2RY11Q96G91 374 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 PPP1R10Q96QC0 940 aaKnown RBP3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CTAGE1Q96RT6 745 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 TRMOQ9BU70 441 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CRB3Q9BUF7 120 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 ABHD14AQ9BUJ0 271 aa3.68□□□□□ -1.82
SDCBPP3-201ENST00000419629 CCDC134Q9H6E4 229 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms