RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 DNM1LO00429 736 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 LYPLA2O95372 231 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ADH1CP00326 375 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 CYP1A1P04798 512 aaPredicted RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 MGAT1P26572 445 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 PPP2R1BP30154 601 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 SOX11P35716 441 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 NUDT2P50583 147 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 DAB2P98082 770 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 RAB30Q15771 203 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ATP6AP1LQ52LC2 224 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 WLSQ5T9L3 541 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 TRIM69Q86WT6 500 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 DENND1CQ8IV53 801 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 P3H2Q8IVL5 708 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 KATNAL2Q8IYT4 538 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 FBXO39Q8N4B4 442 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ANKLE1Q8NAG6 615 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 GPR20Q99678 358 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 UNC93B1Q9H1C4 597 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 NDOR1Q9UHB4 597 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ADAMTS7Q9UKP4 1686 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 NDUFB5O43674 189 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 IMPDH2P12268 514 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 RFC2P35250 354 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZNF143P52747 638 aaPredicted RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 ALDH6A1Q02252 535 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 CSTF3Q12996 717 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 FUT11Q495W5 492 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 ZCCHC8Q6NZY4 707 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 NUDT5Q9UKK9 219 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 PHTF1Q9UMS5 762 aa8.6□□□□□ -1.03
UBR4-206ENST00000419533 TNS1Q9HBL0 1735 aaKnown RBP8.6□□□□□ -1.03
UBR4-206ENST00000419533 ADRB2P07550 413 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 DGKAP23743 735 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 BLVRAP53004 296 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 DNAJC3Q13217 504 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 NFYCQ13952 458 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ZNF470Q6ECI4 717 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 MFSD7Q6UXD7 560 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 CACUL1Q86Y37 369 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 CNDP1Q96KN2 507 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 KLHL28Q9NXS3 571 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 TISP43B9A030 160 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 KATNA1O75449 491 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 KRT8P05787 483 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ITGB5P18084 799 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 TYMPP19971 482 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 PPP3CAQ08209 521 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 INSCQ1MX18 579 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 SLC30A9Q6PML9 568 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 FAM183BPQ6ZVS7 135 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 SLC24A5Q71RS6 500 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 TRAPPC5Q8IUR0 188 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 SLC44A2Q8IWA5 706 aaPredicted RBP8.59□□□□□ -1.03
UBR4-206ENST00000419533 OR56A4Q8NGH8 313 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ELMO3Q96BJ8 720 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 TLE6Q9H808 572 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ZMYND8Q9ULU4 1186 aaPredicted RBP8.59□□□□□ -1.03
UBR4-206ENST00000419533 A0A087X0B3 334 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 QSOX1O00391 747 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 DDX3XO00571 662 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR4-206ENST00000419533 KPNA5O15131 536 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ATP9AO75110 1047 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 GUCY1B2O75343 617 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 PFKMP08237 780 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 KDELR1P24390 212 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 NR6A1Q15406 480 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 CYTH1Q15438 398 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 PAGE2BQ5JRK9 111 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 PIGZQ86VD9 579 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 TDRD5Q8NAT2 981 aaKnown RBP8.59□□□□□ -1.03
UBR4-206ENST00000419533 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 SPPL2BQ8TCT7 592 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 PPP1R13LQ8WUF5 828 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 DTNBP1Q96EV8 351 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 INPP4AQ96PE3 977 aaPredicted RBP8.59□□□□□ -1.03
UBR4-206ENST00000419533 PARVBQ9HBI1 364 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 CATSPERZQ9NTU4 200 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 CRYL1Q9Y2S2 319 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 STARD13Q9Y3M8 1113 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 COL5A3P25940 1745 aaPredicted RBP8.59□□□□□ -1.03
UBR4-206ENST00000419533 KCNK1O00180 336 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 VAPBO95292 243 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 CES1P23141 567 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ACLYP53396 1101 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 ATAD3BQ5T9A4 648 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 WDR93Q6P2C0 686 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 LRRC8DQ7L1W4 858 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 SPATA20Q8TB22 786 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 GRIN3AQ8TCU5 1115 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 VPS50Q96JG6 964 aa8.59□□□□□ -1.03
UBR4-206ENST00000419533 MLPHQ9BV36 600 aaPredicted RBP8.59□□□□□ -1.03
UBR4-206ENST00000419533 A0A087X1B8 175 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.04
UBR4-206ENST00000419533 ARVCFO00192 962 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 RASSF9O75901 435 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 SLC2A4P14672 509 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms