RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 IARS2Q9NSE4 1012 aaKnown RBP14.8□□□□□ -0.04
HDAC9-208ENST00000417496 C20orf96Q9NUD7 363 aaPredicted RBP14.8□□□□□ -0.04
HDAC9-208ENST00000417496 DDX43Q9NXZ2 648 aaKnown RBP14.8□□□□□ -0.04
HDAC9-208ENST00000417496 IGSF9Q9P2J2 1179 aa14.8□□□□□ -0.04
HDAC9-208ENST00000417496 NUP205Q92621 2012 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 MEIS3P2A8K0S8 358 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 TK2O00142 265 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 DYNC1LI2O43237 492 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 CYP2C9P11712 490 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 PTPN1P18031 435 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 AVPR1AP37288 418 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 LIMK2P53671 638 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 POLE2P56282 527 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 TBL3Q12788 808 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 PAFAH1B3Q15102 231 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 DGKDQ16760 1214 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 INSCQ1MX18 579 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 EML3Q32P44 896 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 SPANXN3Q5MJ09 141 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 TMEM135Q86UB9 458 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 OR6Y1Q8NGX8 325 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 URGCPQ8TCY9 931 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 EMID1Q96A84 441 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 CELF6Q96J87 481 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 TNIP3Q96KP6 325 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 FERMT1Q9BQL6 677 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 SIKE1Q9BRV8 207 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 MLPHQ9BV36 600 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 ULBP1Q9BZM6 244 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 LRRC40Q9H9A6 602 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 GPAMQ9HCL2 828 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 GDAP2Q9NXN4 497 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 BFARQ9NZS9 450 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 RCOR3Q9P2K3 495 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 SLC39A10Q9ULF5 831 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 PCDHB12Q9Y5F1 795 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 PHGDHO43175 533 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 CCNT2O60583 730 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 DAB1O75553 588 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 AP2A1O95782 977 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 USP17L7P0C7H9 530 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 NCAM1P13591 858 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 NMBRP28336 390 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 EPHA3P29320 983 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 SPRP35270 261 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 SCNN1AP37088 669 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 GARSP41250 739 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 AFF1P51825 1210 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 AQP4P55087 323 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 IRX1P78414 480 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 EPGNQ6UW88 154 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 ACTRT2Q8TDY3 377 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 CMTM5Q96DZ9 223 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 HNRNPABQ99729 332 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 CDH19Q9H159 772 aa14.79□□□□□ -0.04
HDAC9-208ENST00000417496 SPATS2LQ9NUQ6 558 aaKnown RBP14.79□□□□□ -0.04
HDAC9-208ENST00000417496 PLXNA1Q9UIW2 1896 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 AIM2O14862 343 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 FKBP6O75344 327 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 CD4P01730 458 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 ATP5BP06576 529 aaKnown RBP14.78□□□□□ -0.04
HDAC9-208ENST00000417496 SMIM10L2AP0DMW4 78 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 SMIM10L2BP0DMW5 78 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 COX4I1P13073 169 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 NFKB1P19838 968 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 MPSTP25325 297 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 DUSP28Q4G0W2 176 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 TDRD5Q8NAT2 981 aaKnown RBP14.78□□□□□ -0.04
HDAC9-208ENST00000417496 USP33Q8TEY7 942 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 GATA5Q9BWX5 397 aaPredicted RBP14.78□□□□□ -0.04
HDAC9-208ENST00000417496 RHOBTB2Q9BYZ6 727 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 STN1Q9H668 368 aaKnown RBP14.78□□□□□ -0.04
HDAC9-208ENST00000417496 NMRAL1Q9HBL8 299 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 WDR6Q9NNW5 1121 aaKnown RBP14.78□□□□□ -0.04
HDAC9-208ENST00000417496 STAP1Q9ULZ2 295 aa14.78□□□□□ -0.04
HDAC9-208ENST00000417496 RBM47A0AV96 593 aaKnown RBP14.77□□□□□ -0.04
HDAC9-208ENST00000417496 FESP07332 822 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 RAG1P15918 1043 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 ALOX15P16050 662 aaPredicted RBP14.77□□□□□ -0.04
HDAC9-208ENST00000417496 SERPINB8P50452 374 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 ATXN3P54252 364 aaPredicted RBP14.77□□□□□ -0.04
HDAC9-208ENST00000417496 TPI1P60174 286 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 KLF10Q13118 480 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 ZNF460Q14592 562 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 DBN1Q16643 649 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 CCDC153Q494R4 210 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 SLC30A9Q6PML9 568 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 BNIPLQ7Z465 357 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 KCNMB4Q86W47 210 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 GDPD5Q8WTR4 605 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 MARK4Q96L34 752 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 APBA2Q99767 749 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 DDIT4Q9NX09 232 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 SSX2IPQ9Y2D8 614 aa14.77□□□□□ -0.04
HDAC9-208ENST00000417496 TREHO43280 583 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 JCHAINP01591 159 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 JUNP05412 331 aaKnown RBP14.77□□□□□ -0.05
HDAC9-208ENST00000417496 PAPOLAP51003 745 aaKnown RBP14.77□□□□□ -0.05
HDAC9-208ENST00000417496 DLG1Q12959 904 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms