RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ERBB2P04626 1255 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 SKILP12757 684 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 RPS14P62263 151 aaKnown RBP18.58■□□□□ 0.56
VCP-202ENST00000417448 FMO1Q01740 532 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 PTPN20Q4JDL3 420 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 NAA35Q5VZE5 725 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 IRF2BP2Q7Z5L9 587 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 SLC30A5Q8TAD4 765 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 TTYH3Q9C0H2 523 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 TMEM245Q9H330 911 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 EBF2Q9HAK2 575 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 CPNE5Q9HCH3 593 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 CNGB3Q9NQW8 809 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 SFMBT1Q9UHJ3 866 aa18.58■□□□□ 0.56
VCP-202ENST00000417448 UBR5O95071 2799 aaPredicted RBP18.58■□□□□ 0.56
VCP-202ENST00000417448 B8ZZF3 427 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 GRAP2O75791 330 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 ITGAVP06756 1048 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 RALAP11233 206 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 ACTN2P35609 894 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 CHKAP35790 457 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 RPL34P49207 117 aaKnown RBP18.57■□□□□ 0.56
VCP-202ENST00000417448 C21orf59P57076 290 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 RACK1P63244 317 aaKnown RBP18.57■□□□□ 0.56
VCP-202ENST00000417448 CDR2Q01850 454 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 KCNC4Q03721 635 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 OR6B2Q6IFH4 312 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 FAM183BPQ6ZVS7 135 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 RSRC2Q7L4I2 434 aaKnown RBP18.57■□□□□ 0.56
VCP-202ENST00000417448 TMEM110Q86TL2 294 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 CYB5D2Q8WUJ1 264 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 WBP1Q96G27 269 aa18.57■□□□□ 0.56
VCP-202ENST00000417448 ACE2Q9BYF1 805 aaPredicted RBP18.57■□□□□ 0.56
VCP-202ENST00000417448 SEPT11Q9NVA2 429 aaKnown RBP18.57■□□□□ 0.56
VCP-202ENST00000417448 AGO1Q9UL18 857 aaKnown RBP18.57■□□□□ 0.56
VCP-202ENST00000417448 BOD1L1Q8NFC6 3051 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 LTFP02788 710 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 FYNP06241 537 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 ABCB4P21439 1286 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 CORO1AP31146 461 aaKnown RBP18.56■□□□□ 0.56
VCP-202ENST00000417448 RHDQ02161 417 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 ASIC2Q16515 512 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 DNAAF5Q86Y56 855 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 TMEM35BQ8NCS4 154 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 STK32AQ8WU08 396 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 FAM149B1Q96BN6 582 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 NAF1Q96HR8 494 aaKnown RBP18.56■□□□□ 0.56
VCP-202ENST00000417448 LGMNQ99538 433 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 AGPAT1Q99943 283 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 CLIC5Q9NZA1 410 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 NAALADL1Q9UQQ1 740 aa18.56■□□□□ 0.56
VCP-202ENST00000417448 SLC12A8A0AV02 714 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 WNT9AO14904 365 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 MSI1O43347 362 aaKnown RBP18.55■□□□□ 0.56
VCP-202ENST00000417448 KRT10P13645 584 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 FERP16591 822 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 GLDCP23378 1020 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 EPHA8P29322 1005 aaPredicted RBP18.55■□□□□ 0.56
VCP-202ENST00000417448 HLA-FP30511 346 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 ACADSBP45954 432 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 PSEN1P49768 467 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 NOMO3P69849 1222 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 INSM1Q01101 510 aaPredicted RBP18.55■□□□□ 0.56
VCP-202ENST00000417448 MEA1Q16626 185 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 ARHGAP40Q5TG30 622 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 SFMBT2Q5VUG0 894 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 SYPL2Q5VXT5 272 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 KIAA0895LQ68EN5 471 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 ARHGAP18Q8N392 663 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 DCBLD1Q8N8Z6 715 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 RFFLQ8WZ73 363 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 TTC9Q92623 222 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 SYNCQ9H7C4 482 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 SGK2Q9HBY8 427 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 PRSS16Q9NQE7 514 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 CLCA2Q9UQC9 943 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 ZNF510Q9Y2H8 683 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 DAAM1Q9Y4D1 1078 aa18.55■□□□□ 0.56
VCP-202ENST00000417448 A0A1W2PPC4 97 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 GOLGA8SH3BPF8 625 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 CBFA2T2O43439 604 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 FBXO21O94952 628 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 WISP1O95388 367 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 DNTTP04053 509 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 GYPCP04921 128 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 C6P13671 934 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 CASP14P31944 242 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 CDH5P33151 784 aaPredicted RBP18.54■□□□□ 0.56
VCP-202ENST00000417448 TMPRSS3P57727 454 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 PITX1P78337 314 aaPredicted RBP18.54■□□□□ 0.56
VCP-202ENST00000417448 SRSF1Q07955 248 aaKnown RBP eCLIP18.54■□□□□ 0.56
VCP-202ENST00000417448 BNIP3Q12983 259 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 E2F5Q15329 346 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 FNDC3BQ53EP0 1204 aaKnown RBP18.54■□□□□ 0.56
VCP-202ENST00000417448 DENND1CQ8IV53 801 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 ZNF248Q8NDW4 579 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 RNF139Q8WU17 664 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 HIC2Q96JB3 615 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 SLC2A11Q9BYW1 496 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 ABCC13Q9NSE7 274 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms