RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 CHRNB1P11230 501 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 MXRA7P84157 204 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 RAB39AQ14964 217 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 AGAP9Q5VTM2 703 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 METRNLQ641Q3 311 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 SEPT14Q6ZU15 432 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 CATIPQ7Z7H3 387 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 MRGPRGQ86SM5 289 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 TMEM173Q86WV6 379 aaPredicted RBP5.62□□□□□ -1.51
CSTF1-202ENST00000415828 RHOT2Q8IXI1 618 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 SRRM1Q8IYB3 904 aaKnown RBP5.62□□□□□ -1.51
CSTF1-202ENST00000415828 MMP21Q8N119 569 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 VPS52Q8N1B4 723 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 SPEM1Q8N4L4 309 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 TBC1D15Q8TC07 691 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 PROKR1Q8TCW9 393 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 STAMQ92783 540 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 TSR2Q969E8 191 aaKnown RBP5.62□□□□□ -1.51
CSTF1-202ENST00000415828 VRK1Q99986 396 aaPredicted RBP5.62□□□□□ -1.51
CSTF1-202ENST00000415828 MAN1C1Q9NR34 630 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 SETD4Q9NVD3 440 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 CFAP20Q9Y6A4 193 aaKnown RBP5.62□□□□□ -1.51
CSTF1-202ENST00000415828 FPGT-TNNI3KV9GXZ4 949 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 PKD1L1Q8TDX9 2849 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 LRRK1Q38SD2 2015 aa5.62□□□□□ -1.51
CSTF1-202ENST00000415828 RP1L1Q8IWN7 2480 aaPredicted RBP5.62□□□□□ -1.51
CSTF1-202ENST00000415828 LRRC14BA6NHZ5 514 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 UNC119BA6NIH7 251 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 ZFC3H1O60293 1989 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 CD1AP06126 327 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 SBK3P0C264 359 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 MTHFD1P11586 935 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 KRT4P19013 534 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 PDCP20941 246 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 ZFP36P26651 326 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 KRT17Q04695 432 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 KLRC3Q07444 240 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 KHDC1Q4VXA5 237 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 LY6G5CQ5SRR4 150 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 ODR4Q5SWX8 454 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 Q6ZPA2 131 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 TSHZ1Q6ZSZ6 1077 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 MRGPREQ86SM8 312 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 ULK2Q8IYT8 1036 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 SLC39A11Q8N1S5 342 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 CPEB3Q8NE35 698 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 NLGN4YQ8NFZ3 816 aaPredicted RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 LENG9Q96B70 501 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 MED8Q96G25 268 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 WBP1Q96G27 269 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 MRGPRX4Q96LA9 322 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 TTPALQ9BTX7 342 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 MLST8Q9BVC4 326 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 VN1R3Q9BXE9 311 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 PACSIN1Q9BY11 444 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 DOCK9Q9BZ29 2069 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 KLHL11Q9NVR0 708 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 SPG21Q9NZD8 308 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 ADD3Q9UEY8 706 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 PLEKHB1Q9UF11 243 aaPredicted RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 PA2G4Q9UQ80 394 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 ANKRD6Q9Y2G4 727 aa5.61□□□□□ -1.51
CSTF1-202ENST00000415828 MRPS17Q9Y2R5 130 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 PRRC2CQ9Y520 2896 aaKnown RBP5.61□□□□□ -1.51
CSTF1-202ENST00000415828 STAB1Q9NY15 2570 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 CYP2D7A0A087X1C5 515 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 GAGE12BA1L429 117 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 GAGE12HA6NDE8 117 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 EXTL3O43909 919 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 RAMP2O60895 175 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 PPFIA4O75335 1185 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 ERN1O75460 977 aaKnown RBP5.6□□□□□ -1.51
CSTF1-202ENST00000415828 HAUS5O94927 633 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 CALML3P27482 149 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 SMARCA1P28370 1054 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 GNAI1P63096 354 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 NOMO3P69849 1222 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 NTHL1P78549 312 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 HSD11B2P80365 405 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 TLE1Q04724 770 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 MCL1Q07820 350 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 RESTQ13127 1097 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 PIN1Q13526 163 aaPredicted RBP5.6□□□□□ -1.51
CSTF1-202ENST00000415828 PTPAQ15257 358 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 TRIP6Q15654 476 aaKnown RBP5.6□□□□□ -1.51
CSTF1-202ENST00000415828 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 PABPC1LQ4VXU2 614 aaKnown RBP5.6□□□□□ -1.51
CSTF1-202ENST00000415828 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 FOXR2Q6PJQ5 311 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 TOGARAM2Q6ZUX3 1019 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 CMASQ8NFW8 434 aaPredicted RBP5.6□□□□□ -1.51
CSTF1-202ENST00000415828 NSUN6Q8TEA1 469 aaKnown RBP5.6□□□□□ -1.51
CSTF1-202ENST00000415828 ZBTB10Q96DT7 871 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 RNF31Q96EP0 1072 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 ZNF558Q96NG5 402 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 CASD1Q96PB1 797 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 AGAP2Q99490 1192 aa5.6□□□□□ -1.51
CSTF1-202ENST00000415828 PIH1D3Q9NQM4 214 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms