RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 DCTN4Q9UJW0 460 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 ARHGAP26Q9UNA1 814 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 INPP5FQ9Y2H2 1132 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 H3BRJ5 948 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 RNASEH2AO75792 299 aaKnown RBP20.82■□□□□ 0.92
AP1S3-205ENST00000415298 BMP10O95393 424 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 NUDT1P36639 197 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 RPL21P46778 160 aaKnown RBP20.82■□□□□ 0.92
AP1S3-205ENST00000415298 CLCN3P51790 818 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 DENND1AQ8TEH3 1009 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 TP53INP1Q96A56 240 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 EEF2KMTQ96G04 330 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 ALPK1Q96QP1 1244 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 SLC29A1Q99808 456 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 LPIN3Q9BQK8 851 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 POLR3FQ9H1D9 316 aaPredicted RBP20.82■□□□□ 0.92
AP1S3-205ENST00000415298 BCAP29Q9UHQ4 241 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 PCP4L1A6NKN8 68 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 hCG_2039718K7EN88 272 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 ZW10O43264 779 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 MSI1O43347 362 aaKnown RBP20.82■□□□□ 0.92
AP1S3-205ENST00000415298 PLEKHA7Q6IQ23 1121 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 EFCAB12Q6NXP0 572 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 RBM15BQ8NDT2 890 aaKnown RBP20.82■□□□□ 0.92
AP1S3-205ENST00000415298 DEFB118Q96PH6 123 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 YME1L1Q96TA2 773 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 ZNF717Q9BY31 904 aaPredicted RBP20.82■□□□□ 0.92
AP1S3-205ENST00000415298 RNF208Q9H0X6 261 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 RIC8BQ9NVN3 520 aa20.82■□□□□ 0.92
AP1S3-205ENST00000415298 ACOX3O15254 700 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CSDE1O75534 798 aaKnown RBP20.81■□□□□ 0.92
AP1S3-205ENST00000415298 C22orf31O95567 290 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 PLS3P13797 630 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 NKX3-2P78367 333 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 EFHC1Q5JVL4 640 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 FAM178BQ8IXR5 827 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CARNMT1Q8N4J0 409 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 MCPH1Q8NEM0 835 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 ZUFSPQ96AP4 578 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 MUC3BQ9H195 1237 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CDC42EP4Q9H3Q1 356 aaKnown RBP20.81■□□□□ 0.92
AP1S3-205ENST00000415298 GOLPH3Q9H4A6 298 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 SYTL2Q9HCH5 934 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 GDAP2Q9NXN4 497 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 SNTG2Q9NY99 539 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 NR2E1Q9Y466 385 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 ZMYM2Q9UBW7 1377 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 IGKV6-21A0A0C4DH24 114 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 AREL1O15033 823 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 SLC16A4O15374 487 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 GCNT3O95395 438 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 ACSL3O95573 720 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 SLC18A1P54219 525 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CDK16Q00536 496 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 GK3PQ14409 553 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CLVS2Q5SYC1 327 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 FAM205BPQ63HN1 556 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 NDUFAF2Q8N183 169 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 TTLQ8NG68 377 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 SLC26A7Q8TE54 656 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 JADE3Q92613 823 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CDK5RAP1Q96SZ6 601 aaKnown RBP20.81■□□□□ 0.92
AP1S3-205ENST00000415298 PPP1R16BQ96T49 567 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 MKNK1Q9BUB5 465 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 PACSIN1Q9BY11 444 aa20.81■□□□□ 0.92
AP1S3-205ENST00000415298 MTO1Q9Y2Z2 717 aaKnown RBP20.81■□□□□ 0.92
AP1S3-205ENST00000415298 CCL5P13501 91 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 HOXB1P14653 301 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-205ENST00000415298 GLRA2P23416 452 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 PTPN9P43378 593 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 NPTX2P47972 431 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 ZNF484Q5JVG2 852 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 ZNF720Q7Z2F6 126 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 DEPDC4Q8N2C3 294 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 RFWD2Q8NHY2 731 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 PODXLO00592 558 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 ARL2P36404 184 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 ALDH1A3P47895 512 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 ATAD3BQ5T9A4 648 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 RNF180Q86T96 592 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 IGFN1Q86VF2 1251 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 SYN2Q92777 582 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-205ENST00000415298 PRR11Q96HE9 360 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-205ENST00000415298 RBM15Q96T37 977 aaKnown RBP eCLIP20.8■□□□□ 0.92
AP1S3-205ENST00000415298 MTG1Q9BT17 334 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-205ENST00000415298 SEPT3Q9UH03 358 aa20.8■□□□□ 0.92
AP1S3-205ENST00000415298 PAHP00439 452 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 GAP43P17677 238 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 CPA2P48052 419 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 NKX2-5P52952 324 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-205ENST00000415298 METTL3Q86U44 580 aaKnown RBP20.79■□□□□ 0.92
AP1S3-205ENST00000415298 SNX32Q86XE0 403 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 CFAP36Q96G28 342 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 SEMA6BQ9H3T3 888 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 AVENQ9NQS1 362 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-205ENST00000415298 PAK6Q9NQU5 681 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-205ENST00000415298 DNAJC12Q9UKB3 198 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 A0A0G2JND7 137 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 TREHO43280 583 aa20.79■□□□□ 0.92
AP1S3-205ENST00000415298 CDH16O75309 829 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms