RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 SCN4BQ8IWT1 228 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 NDUFAF2Q8N183 169 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 NUP93Q8N1F7 819 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 ATPAF2Q8N5M1 289 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 OR10T2Q8NGX3 314 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 KLHL29Q96CT2 875 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 TEKT5Q96M29 485 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 KLF6Q99612 283 aaPredicted RBP13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 TRPV6Q9H1D0 765 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 CASS4Q9NQ75 786 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 SAR1AQ9NR31 198 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 ABCF3Q9NUQ8 709 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 LRFN2Q9ULH4 789 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 VANGL2Q9ULK5 521 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 MFHAS1Q9Y4C4 1052 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 PCDHB7Q9Y5E2 793 aa13.79□□□□□ -0.2
SSR4P1-201ENST00000415143 FAM237BA0A1B0GVD1 139 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 WASH4PA8MWX3 477 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 CXorf49A8MYA2 514 aaPredicted RBP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 FAM72CH0Y354 149 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 ARVCFO00192 962 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 RFPL1O75677 317 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 USP1O94782 785 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 C1QAP02745 245 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 SELPP16109 830 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 HOXC13P31276 330 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 POLD2P49005 469 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 ARFIP2P53365 341 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 CSE1LP55060 971 aaKnown RBP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 NIPAL4Q0D2K0 466 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 SNCBQ16143 134 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 FAM72AQ5TYM5 149 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 FAM72DQ6L9T8 149 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 MSANTD2Q6P1R3 559 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 PACS1Q6VY07 963 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 LRRTM3Q86VH5 581 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 FAM72BQ86X60 149 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 CCDC117Q8IWD4 279 aaPredicted RBP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 COLGALT2Q8IYK4 626 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 ATP6V0D2Q8N8Y2 350 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 PPP1R14CQ8TAE6 165 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 HASPINQ8TF76 798 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 NSMCE1Q8WV22 266 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 E2F7Q96AV8 911 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 TIFAQ96CG3 184 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 CERS2Q96G23 380 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 MRPL9Q9BYD2 267 aaKnown RBP13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 TMLHEQ9NVH6 421 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 MID2Q9UJV3 735 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 TLR6Q9Y2C9 796 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 RPS6KL1Q9Y6S9 549 aa13.78□□□□□ -0.2
SSR4P1-201ENST00000415143 WDR91A4D1P6 747 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 KCNK1O00180 336 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 TNFRSF10BO14763 440 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 MATN3O15232 486 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 ZBTB24O43167 697 aaPredicted RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 TIMM44O43615 452 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 ALDH2P05091 517 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 MPOP05164 745 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CSH1P0DML2 217 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CSH2P0DML3 217 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 IGFBP6P24592 240 aaPredicted RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 HNRNPH1P31943 449 aaKnown RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CDK7P50613 346 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 TRIM60Q495X7 471 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 TMEM31Q5JXX7 168 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 MROH9Q5TGP6 573 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CGB2Q6NT52 195 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 SLC39A5Q6ZMH5 540 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 LRRC8DQ7L1W4 858 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 PACS2Q86VP3 889 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 LCA5Q86VQ0 697 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 SUGP1Q8IWZ8 645 aaKnown RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 MPP5Q8N3R9 675 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 LRRN4Q8WUT4 740 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 C10orf82Q8WW14 230 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 SEPT8Q92599 483 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 OXNAD1Q96HP4 312 aaPredicted RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CEP295NLQ96MC4 621 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 C7orf26Q96N11 449 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 TSNARE1Q96NA8 513 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 FCRL5Q96RD9 977 aa13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 CDK5RAP1Q96SZ6 601 aaKnown RBP13.77□□□□□ -0.21
SSR4P1-201ENST00000415143 SIK2Q9H0K1 926 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms