RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 NRSN1Q8IZ57 195 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARL14EPQ8N8R7 260 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 NPIPB3Q92617 1050 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 RSC1A1Q92681 617 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAR2Q96K12 515 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SERINC2Q96SA4 455 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SCNM1Q9BWG6 230 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 RWDD1Q9H446 243 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SEMA4BQ9NPR2 832 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 RRAGDQ9NQL2 400 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 FNIP2Q9P278 1114 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 IPO11Q9UI26 975 aaKnown RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 AGO2Q9UKV8 859 aaKnown RBP4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC39A10Q9ULF5 831 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 KNSTRNQ9Y448 316 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 DAAM1Q9Y4D1 1078 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 PCDHB7Q9Y5E2 793 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 PCDHGB2Q9Y5G2 931 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 NLRP1Q9C000 1473 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 ASXL1Q8IXJ9 1541 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAM135AQ9P2D6 1515 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 UNC13BO14795 1591 aa4.09□□□□□ -1.75
HMGB3P23-201ENST00000414981 PBRM1Q86U86 1689 aa4.09□□□□□ -1.76
HMGB3P23-201ENST00000414981 LOC105369274A0A096LPK9 316 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 LOC102723532A0A0G2JNH3 316 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 FAM90A10PA6NDY2 464 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF814B7Z6K7 855 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 POLR3AO14802 1390 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 NKX2-8O15522 239 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 TCEA3O75764 348 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 OAZ2O95190 189 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 FGF2P09038 288 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 RFPL3SP0C7P2 107 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 NPPBP16860 134 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 SERPINB3P29508 390 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 PPP2R1AP30153 589 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 CASP2P42575 452 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 CLK1P49759 484 aaKnown RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 CCDC173Q0VFZ6 552 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 GRM4Q14833 912 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 AAK1Q2M2I8 961 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 CCDC92Q53HC0 331 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ALFQ53S48 1182 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 LIPMQ5VYY2 423 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF474Q6S9Z5 364 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 DHRS13Q6UX07 377 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 SLC39A5Q6ZMH5 540 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF517Q6ZMY9 492 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ANKRD23Q86SG2 305 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 MAGI2Q86UL8 1455 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 TRABD2AQ86V40 505 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 EGFL6Q8IUX8 553 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ADGRF4Q8IZF3 695 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 OR4N4Q8N0Y3 316 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ACRBPQ8NEB7 543 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF548Q8NEK5 533 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ANP32BQ92688 251 aaKnown RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 KIAA1191Q96A73 305 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 TRIM44Q96DX7 344 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 TMEM41AQ96HV5 264 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 TTC14Q96N46 770 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 GPR78Q96P69 363 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 IFT140Q96RY7 1462 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 ELAC2Q9BQ52 826 aaKnown RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 WACQ9BTA9 647 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 RNF17Q9BXT8 1623 aaKnown RBP4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 PANK3Q9H999 370 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 GRPEL1Q9HAV7 217 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 NLRC4Q9NPP4 1024 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 PLEKHH1Q9ULM0 1364 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 WDR7Q9Y4E6 1490 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 NCOA3Q9Y6Q9 1424 aa4.08□□□□□ -1.76
HMGB3P23-201ENST00000414981 KIAA1210Q9ULL0 1709 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 IQGAP3Q86VI3 1631 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 REREQ9P2R6 1566 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ADGRL1O94910 1474 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 A2MP01023 1474 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 GRIN2AQ12879 1464 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 MAGI1Q96QZ7 1491 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF644Q9H582 1327 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 KIR2DS5A0A0G2JLQ3 304 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 IGLV5-39A0A0G2JS06 123 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 CD8B2A6NJW9 211 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 KIR2DS3K7RE56 304 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 PCDH17O14917 1159 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 UGDHO60701 494 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 PPP6R2O75170 966 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 CER1O95813 267 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 CYP3A4P08684 503 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 SNHG28P0DPA3 235 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 PSG1P11464 419 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 IGFBP2P18065 325 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ABCB4P21439 1286 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 DDIT3P35638 169 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ALDH7A1P49419 539 aaKnown RBP4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ALDH18A1P54886 795 aaKnown RBP4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 TLE3Q04726 772 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 FHL1Q13642 323 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 MIDNQ504T8 468 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 C20orf194Q5TEA3 1177 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms