RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 RNF225M0QZC1 329 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 MED7O43513 233 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 TLR5O60602 858 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 USP12O75317 370 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 GFPT2O94808 682 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 PENKP01210 267 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 DNTTP04053 509 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 ITGB2P05107 769 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 IGHV4-34P06331 123 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 PDGFRBP09619 1106 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 MYF5P13349 255 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 CD38P28907 300 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 RBMS1P29558 406 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 PRKCIP41743 596 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 SKOR1P84550 965 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 ARID5AQ03989 594 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 KLHL30Q0D2K2 578 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 GEN1Q17RS7 908 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 PROX2Q3B8N5 592 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 ARL13BQ3SXY8 428 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 CDCP2Q5VXM1 449 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 ZNF677Q86XU0 584 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 UBR7Q8N806 425 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 RBBP8NLQ8NC74 664 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 GOLGA1Q92805 767 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 BHMTQ93088 406 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 ELMO3Q96BJ8 720 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 BAG1Q99933 345 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 SEMA3CQ99985 751 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 MRPL45Q9BRJ2 306 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 ARHGAP9Q9BRR9 750 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 KLF16Q9BXK1 252 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 AASDHPPTQ9NRN7 309 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 TPX2Q9ULW0 747 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 BOD1L1Q8NFC6 3051 aa14.03□□□□□ -0.16
RAPGEF1-204ENST00000414781 DOPEY1Q5JWR5 2465 aa14.02□□□□□ -0.16
RAPGEF1-204ENST00000414781 ATP8B3O60423 1300 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 FAM92AA1XBS5 289 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CLEC18AA5D8T8 446 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CYP26A1O43174 497 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 VDRP11473 427 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 NDST1P52848 882 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 TLE1Q04724 770 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 SFSWAPQ12872 951 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 STILQ15468 1287 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 MEA1Q16626 185 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CLEC18BQ6UXF7 455 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 IRF2BP2Q7Z5L9 587 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 LRRC8AQ8IWT6 810 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CRYBG2Q8N1P7 616 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CLEC18CQ8NCF0 446 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CCDC42Q96M95 316 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 HEXIM2Q96MH2 286 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 CIPCQ9C0C6 399 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 ZNF518BQ9C0D4 1074 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 SDCBP2Q9H190 292 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 PLK2Q9NYY3 685 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 IL37Q9NZH6 218 aa14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 AJAP1Q9UKB5 411 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-204ENST00000414781 SSU72P8A0A1W2PR75 194 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 WNT1P04628 370 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 CYP11B1P15538 503 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 CLCN1P35523 988 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 SLC5A3P53794 718 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 RAD23BP54727 409 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 NXPH1P58417 271 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 NFKB2Q00653 900 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 ZNF211Q13398 564 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 HS1BP3Q53T59 392 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 TDRD12Q587J7 1177 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 PPP1R2P3Q6NXS1 205 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 USP30Q70CQ3 517 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 KANSL1Q7Z3B3 1105 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 CCDC170Q8IYT3 715 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 GRAMD1AQ96CP6 724 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 TRIM44Q96DX7 344 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 PIWIL1Q96J94 861 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 CCNL2Q96S94 520 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 PDCL3Q9H2J4 239 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 DEF6Q9H4E7 631 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 TJP2Q9UDY2 1190 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 SCML1Q9UN30 329 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 NCKAP1Q9Y2A7 1128 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 MAN2B2Q9Y2E5 1009 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 ZNF510Q9Y2H8 683 aa14.01□□□□□ -0.17
RAPGEF1-204ENST00000414781 CKAP5Q14008 2032 aa14□□□□□ -0.17
RAPGEF1-204ENST00000414781 LZTS3O60299 673 aaPredicted RBP14□□□□□ -0.17
RAPGEF1-204ENST00000414781 OPA1O60313 960 aa14□□□□□ -0.17
RAPGEF1-204ENST00000414781 CSO75390 466 aaKnown RBP14□□□□□ -0.17
RAPGEF1-204ENST00000414781 IPO7O95373 1038 aaKnown RBP14□□□□□ -0.17
RAPGEF1-204ENST00000414781 CD19P15391 556 aa14□□□□□ -0.17
RAPGEF1-204ENST00000414781 PTPN1P18031 435 aaKnown RBP14□□□□□ -0.17
RAPGEF1-204ENST00000414781 ITGB6P18564 788 aa14□□□□□ -0.17
RAPGEF1-204ENST00000414781 TNFAIP3P21580 790 aa14□□□□□ -0.17
RAPGEF1-204ENST00000414781 FECHP22830 423 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms