RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SH2D3CQ8N5H7 860 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 RTL3Q8N8U3 475 aaKnown RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 TTC13Q8NBP0 860 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 NKD2Q969F2 451 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 CCDC114Q96M63 670 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 LGMNQ99538 433 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 CATSPERBQ9H7T0 1116 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 LSM7Q9UK45 103 aaKnown RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 ZNF148Q9UQR1 794 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 CHD5Q8TDI0 1954 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 DENND4AQ7Z401 1863 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 MCF2LO15068 1137 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 FGF10O15520 208 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 DR1Q01658 176 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 TRADDQ15628 312 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 C5orf22Q49AR2 442 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 ATAT1Q5SQI0 421 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 CES5AQ6NT32 575 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 ARHGAP12Q8IWW6 846 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 OR52K2Q8NGK3 314 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 DEPDC1BQ8WUY9 529 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 PABPC5Q96DU9 382 aaKnown RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 ASB16Q96NS5 453 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 NOL6Q9H6R4 1146 aaKnown RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 HOMER3Q9NSC5 361 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 SOBPA7XYQ1 873 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 H3BQ06 376 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-202ENST00000414700 GFRA2O00451 464 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 RHOQP17081 205 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 HTR7P34969 479 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 NR2C2P49116 596 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 MTA1Q13330 715 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 TRIP13Q15645 432 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-202ENST00000414700 DRICH1Q6PGQ1 229 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-202ENST00000414700 JAMLQ86YT9 394 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 FAM217AQ8IXS0 508 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 LINC00597Q9H2U6 94 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 POMKQ9H5K3 350 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 TMEM248Q9NWD8 314 aa15.91■□□□□ 0.14
SHMT2-202ENST00000414700 E2F8A0AVK6 867 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ESYT3A0FGR9 886 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 H7C0C1 242 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 FAM107AO95990 144 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ETS1P14921 441 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 NR1D1P20393 614 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 CALRP27797 417 aaKnown RBP15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ATP5OP48047 213 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 GUCY1A3Q02108 690 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 USP4Q13107 963 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 CFAP58Q5T655 872 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 C6orf89Q6UWU4 347 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ARHGAP36Q6ZRI8 547 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 TPGS1Q6ZTW0 290 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 SMRP1Q8NCR6 262 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ATL2Q8NHH9 583 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 MYADMQ96S97 322 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 CCT8L2Q96SF2 557 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 CDX2Q99626 313 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-202ENST00000414700 SLC39A8Q9C0K1 460 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 PLK2Q9NYY3 685 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 WASH4PA8MWX3 477 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 HEXIM1O94992 359 aaKnown RBP15.9■□□□□ 0.14
SHMT2-202ENST00000414700 LATS1O95835 1130 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ITGAVP06756 1048 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ZSCAN5DPP0CG00 497 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 SP100P23497 879 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-202ENST00000414700 RBL1P28749 1068 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 OR1E1P30953 314 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ACBD5Q5T8D3 534 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-202ENST00000414700 DARS2Q6PI48 645 aaKnown RBP15.9■□□□□ 0.14
SHMT2-202ENST00000414700 PARP9Q8IXQ6 854 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 FAM71DQ8N9W8 422 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 USP29Q9HBJ7 922 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 ZMYM5Q9UJ78 669 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 WNT6Q9Y6F9 365 aa15.9■□□□□ 0.14
SHMT2-202ENST00000414700 SGK1O00141 431 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 ECEL1O95672 775 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 VAV1P15498 845 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 SERPINB6P35237 376 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 MDH1P40925 334 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 IFT88Q13099 833 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 GLE1Q53GS7 698 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 RABGAP1LQ5R372 815 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 KCTD16Q68DU8 428 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CCDC121Q6ZUS5 278 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 IQCKQ8N0W5 287 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 MREGQ8N565 214 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 ALLCQ8N6M5 410 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 TDRD5Q8NAT2 981 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CCNYQ8ND76 341 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CCDC26Q8TAB7 109 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 WFDC5Q8TCV5 224 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 SMARCD2Q92925 531 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 GUCD1Q96NT3 240 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 TRIM31Q9BZY9 425 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CENPHQ9H3R5 247 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 PRDM16Q9HAZ2 1276 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 DRG1Q9Y295 367 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 NEU2Q9Y3R4 380 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms