RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MMP13P45452 471 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 UBE3AQ05086 875 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZBTB16Q05516 673 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 DLGAP5Q15398 846 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 RUNDC3AQ59EK9 446 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 TTC39AQ5SRH9 613 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 TTLL5Q6EMB2 1281 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 C11orf87Q6NUJ2 197 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 AADACL2Q6P093 401 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 BRSK2Q8IWQ3 736 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 DDIASQ8IXT1 998 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 ANKRD44Q8N8A2 993 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 SLC44A5Q8NCS7 719 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 MPLKIPQ8TAP9 179 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 C2CD4CQ8TF44 421 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 KCNJ9Q92806 393 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 KAT2AQ92830 837 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 RPL36ALQ969Q0 106 aaKnown RBP4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 RBM17Q96I25 401 aaKnown RBP4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZFYVE19Q96K21 471 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 FRG2BQ96QU4 278 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 REEP2Q9BRK0 252 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 TRMOQ9BU70 441 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 FRMD8Q9BZ67 464 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 SPAG4Q9NPE6 437 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 TMEM160Q9NX00 188 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 LAMP3Q9UQV4 416 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 GDAQ9Y2T3 454 aa4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 LRRFIP2Q9Y608 721 aaKnown RBP4.18□□□□□ -1.74
HMGB1P11-201ENST00000413899 SCRIBQ14160 1630 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 DPPA5A6NC42 116 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 CXorf65A6NEN9 183 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 C17orf100A8MU93 164 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 FOXO6A8MYZ6 492 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 CREB3O43889 395 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 DHX16O60231 1041 aaKnown RBP4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 MOSPD3O75425 235 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 GSTM2P28161 218 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 CHRNA5P30532 468 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 GJC1P36383 396 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 CCR5P51681 352 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 VAMP2P63027 116 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 TLE2Q04725 743 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 CHRNDQ07001 517 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 MTX1Q13505 466 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 SLC12A1Q13621 1099 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 KLF9Q13886 244 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 GALNT3Q14435 633 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 TAF12Q16514 161 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 ARL13AQ5H913 290 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 PXDC1Q5TGL8 231 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 CYB5R4Q7L1T6 521 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 VPS52Q8N1B4 723 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 DENND1AQ8TEH3 1009 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 SH3KBP1Q96B97 665 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 MSI2Q96DH6 328 aaKnown RBP4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 THSD1Q9NS62 852 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 RRN3Q9NYV6 651 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 PDP2Q9P2J9 529 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 UTS2RQ9UKP6 389 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 FBXO4Q9UKT5 387 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 NACADO15069 1562 aa4.17□□□□□ -1.74
HMGB1P11-201ENST00000413899 LY6G6EA0A0G2JKS1 128 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 TCRBV7S3A2A0A539 114 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 ZNF814B7Z6K7 855 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 RHODO00212 210 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 PPEF2O14830 753 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 SYN3O14994 580 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 ATG13O75143 517 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 CDK4P11802 303 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 MTNR1AP48039 350 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 ARHGAP8P85298 464 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 GOLGA8FQ08AF8 430 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 RBMS2Q15434 407 aaKnown RBP4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 C5orf22Q49AR2 442 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 WDR45BQ5MNZ6 344 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 ASPHD1Q5U4P2 390 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 SHC4Q6S5L8 630 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 RNF144BQ7Z419 303 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 KDELC2Q7Z4H8 507 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 MRPL10Q7Z7H8 261 aaKnown RBP4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 TMEM217Q8N7C4 229 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 HDAC7Q8WUI4 952 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 NCSTNQ92542 709 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 RNFT2Q96EX2 444 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 TBATAQ96M53 351 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 CADM1Q9BY67 442 aaKnown RBP4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 RNF146Q9NTX7 359 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 TRNAU1APQ9NX07 287 aaKnown RBP4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 MSRB1Q9NZV6 116 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 UPB1Q9UBR1 384 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 GTF2A1LQ9UNN4 478 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 OSGIN2Q9Y236 505 aa4.16□□□□□ -1.74
HMGB1P11-201ENST00000413899 TRBV5-7A0A0A0MS05 114 aa4.15□□□□□ -1.75
HMGB1P11-201ENST00000413899 RRN3P2A6NIE6 340 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1202.6 ms