RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 THAP1Q9NVV9 213 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 IMPAD1Q9NX62 359 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 TAGLN3Q9UI15 199 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 TLR5O60602 858 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 PPP1R11O60927 126 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-202ENST00000413872 XRCC4Q13426 336 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 PADI4Q9UM07 663 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 GUCY1B2O75343 617 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 BGNP21810 368 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 IRAK1BP1Q5VVH5 260 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 SERPINA13PQ6UXR4 307 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 DENND1CQ8IV53 801 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 ATL1Q8WXF7 558 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 TCF7L2Q9NQB0 619 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 IFT172Q9UG01 1749 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 PARP4Q9UKK3 1724 aaKnown RBP17.57■□□□□ 0.4
PHRF1-202ENST00000413872 RASSF10A6NK89 507 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 TBL1XO60907 577 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 GUCA1CO95843 209 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 CCNB1P14635 433 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 TFE3P19532 575 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-202ENST00000413872 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.45e-8■■■□□ 18.2
PHRF1-202ENST00000413872 GRAMD4Q6IC98 578 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 LRRC8DQ7L1W4 858 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 VPS33AQ96AX1 596 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 QRFPRQ96P65 431 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 MAFBQ9Y5Q3 323 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-202ENST00000413872 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 AP5Z1O43299 807 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 SLC2A4P14672 509 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 ITGB6P18564 788 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 TYMPP19971 482 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 SSTR1P30872 391 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 HNRNPH3P31942 346 aaKnown RBP17.57■□□□□ 0.4
PHRF1-202ENST00000413872 ARSHQ5FYA8 562 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 PRMT9Q6P2P2 845 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 CD99L2Q8TCZ2 262 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 PRRG3Q9BZD7 231 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 CHST7Q9NS84 486 aa17.57■□□□□ 0.4
PHRF1-202ENST00000413872 SMIM28A0A1B0GU29 152 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 SULT2A1Q06520 285 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 KCNA10Q16322 511 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 LNX1Q8TBB1 728 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-202ENST00000413872 UBE2E3Q969T4 207 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 VPS50Q96JG6 964 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 CDHR5Q9HBB8 845 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 RPS6KB2Q9UBS0 482 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 CA12O43570 354 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 OR1D2P34982 312 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 STRADAQ7RTN6 431 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 MILR1Q7Z6M3 343 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 FAM120BQ96EK7 910 aaKnown RBP17.56■□□□□ 0.4
PHRF1-202ENST00000413872 DHX33Q9H6R0 707 aaKnown RBP17.56■□□□□ 0.4
PHRF1-202ENST00000413872 CAPN10Q9HC96 672 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.56■□□□□ 0.4
PHRF1-202ENST00000413872 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
PHRF1-202ENST00000413872 MAPRE3Q9UPY8 281 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 NR5A2O00482 541 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 APOA1P02647 267 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 FCGR1AP12314 374 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 FUT11Q495W5 492 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 PHF21BQ96EK2 531 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 TMEM120AQ9BXJ8 343 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 ARHGAP28Q9P2N2 729 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 GNPTGQ9UJJ9 305 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 ADAM28Q9UKQ2 775 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 PADI3Q9ULW8 664 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 BTN3A1O00481 513 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 CPSF4O95639 269 aaKnown RBP17.56■□□□□ 0.4
PHRF1-202ENST00000413872 ADH1CP00326 375 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 ITGAVP06756 1048 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 GJB1P08034 283 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 TTPAP49638 278 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 CCDC157Q569K6 752 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 AFTPHQ6ULP2 937 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 TRAPPC5Q8IUR0 188 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 METTL6Q8TCB7 284 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 BAP1Q92560 729 aa17.56■□□□□ 0.4
PHRF1-202ENST00000413872 CTSEP14091 401 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ARL2P36404 184 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 SLC1A6P48664 564 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 EVX2Q03828 476 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 RUNX1T1Q06455 604 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 GRM3Q14832 879 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 CRY1Q16526 586 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 TEX9Q8N6V9 391 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ZSWIM2Q8NEG5 633 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 TAS2R14Q9NYV8 317 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 OPTCQ9UBM4 332 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 PCYOX1Q9UHG3 505 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 RAB21Q9UL25 225 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 PSMB4P28070 264 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 SOX11P35716 441 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 DAB2P98082 770 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 LRRC36Q1X8D7 754 aa17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ZCCHC8Q6NZY4 707 aaKnown RBP17.55■□□□□ 0.4
PHRF1-202ENST00000413872 ZNF655Q8N720 491 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms