RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TMEM191CA6NGB0 347 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 LRRC72A6NJI9 287 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 WASH3PC4AMC7 463 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 RIOK3O14730 519 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 ADCY5O95622 1261 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PRNPP04156 253 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PLEKP08567 350 aaPredicted RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 ZNF883P0CG24 379 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PNMA6AP0CW24 399 aaPredicted RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 GOT1P17174 413 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PCK1P35558 622 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 DHPSP49366 369 aaPredicted RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 KLK7P49862 253 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 CCR5P51681 352 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 NDST2P52849 883 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 COPAP53621 1224 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 RPS14P62263 151 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 CREB5Q02930 508 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 GFPT1Q06210 699 aaPredicted RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 OVGP1Q12889 678 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 MAMLD1Q13495 774 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 TEAD4Q15561 434 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 AASDHQ4L235 1098 aaPredicted RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 SLC45A4Q5BKX6 768 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 FSCBQ5H9T9 825 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 EFHC2Q5JST6 749 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 ERMARDQ5T6L9 678 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 C9orf64Q5T6V5 341 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 SPECC1LQ69YQ0 1117 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 IL31Q6EBC2 164 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 CXorf57Q6NSI4 855 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 KIAA1211LQ6NV74 962 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 LUZP1Q86V48 1076 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 CFAP52Q8N1V2 620 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 DCLK2Q8N568 766 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PCDH20Q8N6Y1 951 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 FAM172AQ8WUF8 416 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 SLC20A1Q8WUM9 679 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 OR8D1Q8WZ84 308 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PTPRN2Q92932 1015 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 IGSF8Q969P0 613 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 RAB7BQ96AH8 199 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 FAM131CQ96AQ9 280 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 TBC1D31Q96DN5 1066 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 MYO19Q96H55 970 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 MRGPRX3Q96LB0 322 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PCDHB18PQ96TA0 734 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 EPAS1Q99814 870 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 C11orf70Q9BRQ4 267 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 TPSD1Q9BZJ3 242 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 MKRN2Q9H000 416 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 MUC3BQ9H195 1237 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 TSPY26PQ9H489 355 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 METTL5Q9NRN9 209 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 SEPT11Q9NVA2 429 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 HAUS2Q9NVX0 235 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 CLEC4EQ9ULY5 219 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 DMTF1Q9Y222 760 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 CHD5Q8TDI0 1954 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 PTPRZ1P23471 2315 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 PI4KAP42356 2102 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 ABCA7Q8IZY2 2146 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 ZFHX2Q9C0A1 2572 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 SYNJ2BP-COX16A0A087WUM0 186 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 A0A1W2PQ67 120 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 MYO1FO00160 1098 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 TOR1BO14657 336 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 TM4SF5O14894 197 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 SRGAP2O75044 1071 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 POP4O95707 220 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 CSRP1P21291 193 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 PRKCHP24723 683 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 CD27P26842 260 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 SLC8A1P32418 973 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 WASP42768 502 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 ATXN3P54252 364 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 HDAC4P56524 1084 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 PITX1P78337 314 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 ATP11AP98196 1134 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 GNA12Q03113 381 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 SRSF5Q13243 272 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 SUZ12Q15022 739 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 POLD3Q15054 466 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 DLG2Q15700 870 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 CST6Q15828 149 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 HADHQ16836 314 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 RSPO4Q2I0M5 234 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 PARP15Q460N3 678 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 ACCSLQ4AC99 568 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 MANEALQ5VSG8 457 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 SARM1Q6SZW1 724 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 KIAA1324Q6UXG2 1013 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 ZNF571Q7Z3V5 609 aaPredicted RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 PRPF39Q86UA1 669 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 IQCHQ86VS3 1027 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 DCP2Q8IU60 420 aaKnown RBP6.55□□□□□ -1.36
USP54-202ENST00000413442 CNGA4Q8IV77 575 aa6.55□□□□□ -1.36
USP54-202ENST00000413442 SFTPA1Q8IWL2 248 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms