RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PAGE1O75459 146 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 SLC2A3P11169 496 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 HOXB3P14651 431 aaPredicted RBP19.78■□□□□ 0.76
CPSF7-204ENST00000413232 SLC6A3Q01959 620 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 PTK2Q05397 1052 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 ELAVL3Q14576 367 aaKnown RBP19.78■□□□□ 0.76
CPSF7-204ENST00000413232 SUZ12Q15022 739 aaKnown RBP19.78■□□□□ 0.76
CPSF7-204ENST00000413232 HSP90AA4PQ58FG1 418 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 MIIPQ5JXC2 388 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.78■□□□□ 0.76
CPSF7-204ENST00000413232 SND1Q7KZF4 910 aaKnown RBP eCLIP19.78■□□□□ 0.76
CPSF7-204ENST00000413232 SLC26A9Q7LBE3 791 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 TMPRSS7Q7RTY8 843 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 FEM1AQ9BSK4 669 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 ACE2Q9BYF1 805 aaPredicted RBP19.78■□□□□ 0.76
CPSF7-204ENST00000413232 PIGVQ9NUD9 493 aa19.78■□□□□ 0.76
CPSF7-204ENST00000413232 COL5A1P20908 1838 aaPredicted RBP19.77■□□□□ 0.76
CPSF7-204ENST00000413232 M0QYT0 321 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 DAB1O75553 588 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 CNTN5O94779 1100 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 ADCY5O95622 1261 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 ADH1BP00325 375 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 GRK6P43250 576 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 CCR5P51681 352 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 KCNMA1Q12791 1236 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 POM121L1PQ3SYA9 428 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 RABGAP1LQ5R372 815 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 ARTNQ5T4W7 220 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 TTC39BQ5VTQ0 682 aaPredicted RBP19.77■□□□□ 0.76
CPSF7-204ENST00000413232 FAM71AQ8IYT1 594 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 MLKLQ8NB16 471 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 MDM1Q8TC05 714 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 FAM131CQ96AQ9 280 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 NPY6RQ99463 290 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 SIK2Q9H0K1 926 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 TMPRSS4Q9NRS4 437 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 ARHGAP20Q9P2F6 1191 aa19.77■□□□□ 0.76
CPSF7-204ENST00000413232 ITPR1Q14643 2758 aa19.77■□□□□ 0.75
CPSF7-204ENST00000413232 CBX4O00257 560 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 TNFSF14O43557 240 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 ATP9BO43861 1147 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 RTN2O75298 545 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 MT-CO1P00395 513 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 CD38P28907 300 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 NOS2P35228 1153 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 KRT9P35527 623 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 NNMTP40261 264 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 C21orf59P57076 290 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 SULT2A1Q06520 285 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 SFSWAPQ12872 951 aaKnown RBP19.76■□□□□ 0.75
CPSF7-204ENST00000413232 MAN2A1Q16706 1144 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 DPCR1Q3MIW9 517 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 C5orf22Q49AR2 442 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 ALFQ53S48 1182 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 ZNF683Q8IZ20 524 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 ZNF397Q8NF99 534 aaPredicted RBP19.76■□□□□ 0.75
CPSF7-204ENST00000413232 SPAG5Q96R06 1193 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 ELF4Q99607 663 aaPredicted RBP19.76■□□□□ 0.75
CPSF7-204ENST00000413232 NDST4Q9H3R1 872 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 AASDHPPTQ9NRN7 309 aa19.76■□□□□ 0.75
CPSF7-204ENST00000413232 TRPM6Q9BX84 2022 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3DA0A087WVF3 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3IA0A087WXS9 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3EA0A087X179 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3KA0A087X1G2 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 FAM149AA5PLN7 773 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3FA6NER0 549 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3LB9A6J9 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 RNF103O00237 685 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 LATO43561 262 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3HP0C7X1 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 VASPP50552 380 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 RNASE9P60153 205 aaKnown RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 ZNF177Q13360 481 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 DRAP1Q14919 205 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 DLG2Q15700 870 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 ACCSLQ4AC99 568 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 VWA3BQ502W6 1294 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 C2CD6Q53TS8 623 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 CCDC157Q569K6 752 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3GQ6DHY5 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3CQ6IPX1 549 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TRNP1Q6NT89 227 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 Q6ZVU0 165 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D3Q8IZP1 549 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-204ENST00000413232 SERAC1Q96JX3 654 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 NOX5Q96PH1 765 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 PSMB7Q99436 277 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 ARHGEF38Q9NXL2 777 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 PPM1HQ9ULR3 514 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 TBC1D30Q9Y2I9 924 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 FHOD1Q9Y613 1164 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 LOC400499M0QZD8 3231 aa19.75■□□□□ 0.75
CPSF7-204ENST00000413232 SNAP91O60641 907 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 MAT2AP31153 395 aaKnown RBP19.74■□□□□ 0.75
CPSF7-204ENST00000413232 CXCR3P49682 368 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 CNTN1Q12860 1018 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 SPATS2Q86XZ4 545 aaKnown RBP19.74■□□□□ 0.75
CPSF7-204ENST00000413232 SH2D3CQ8N5H7 860 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms