RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
NEDD1-202ENST00000411739 IP6K2Q9UHH9 426 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 CYP8B1Q9UNU6 501 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 FANCMQ8IYD8 2048 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 CBX4O00257 560 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 TMEM253P0C7T8 217 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 L1CAMP32004 1257 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 COPAP53621 1224 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 C6orf118Q5T5N4 469 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 GAB3Q8WWW8 586 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 KLHL11Q9NVR0 708 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 VPS51Q9UID3 782 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 SMG5Q9UPR3 1016 aaKnown RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 EP300Q09472 2414 aaPredicted RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 RIF1Q5UIP0 2472 aaKnown RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 PRR23AA6NEV1 266 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 SMAD6O43541 496 aaKnown RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 GFRA3O60609 400 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 LMNAP02545 664 aaKnown RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 ASLP04424 464 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 RHOQP17081 205 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 GOT1P17174 413 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 MAGEA1P43355 309 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 PLK1P53350 603 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 TPI1P60174 286 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 NRG1Q02297 640 aaPredicted RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 GNA12Q03113 381 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 PIGHQ14442 188 aaPredicted RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 MESDQ14696 234 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 CCDC6Q16204 474 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 USP39Q53GS9 565 aaKnown RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 SETD3Q86TU7 594 aaPredicted RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 FAM124AQ86V42 546 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 ZNF354CQ86Y25 554 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 EPAS1Q99814 870 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 PRDM16Q9HAZ2 1276 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 TMEM51Q9NW97 253 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 MBD1Q9UIS9 605 aaPredicted RBP12.28□□□□□ -0.44
NEDD1-202ENST00000411739 HYOU1Q9Y4L1 999 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 DOCK4Q8N1I0 1966 aa12.28□□□□□ -0.44
NEDD1-202ENST00000411739 PROB1E7EW31 1015 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 EEF2KO00418 725 aaKnown RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 RARAP10276 462 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 TAS2R40P59535 323 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 SEMA3BQ13214 749 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 MAP7D1Q3KQU3 841 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 RAD9BQ6WBX8 426 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 ARMCX6Q7L4S7 300 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 CELF6Q96J87 481 aaKnown RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 PANX2Q96RD6 677 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 HINFPQ9BQA5 517 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 KLC2Q9H0B6 622 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 EPC1Q9H2F5 836 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 NOL6Q9H6R4 1146 aaKnown RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 ATP13A1Q9HD20 1204 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 TMEM248Q9NWD8 314 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 MFHAS1Q9Y4C4 1052 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 MUC22E2RYF6 1773 aaPredicted RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 CCDC163A0A0D9SF12 145 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 ILVBLA1L0T0 632 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 NPC1O15118 1278 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 DAPK3O43293 454 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 TNNT1P13805 278 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 CAMK2GQ13555 558 aaPredicted RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 DLG2Q15700 870 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 HNRNPA1L2Q32P51 320 aaKnown RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 POM121L1PQ3SYA9 428 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 C9orf64Q5T6V5 341 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 STK40Q8N2I9 435 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 ATP11CQ8NB49 1132 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 PTPRN2Q92932 1015 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
NEDD1-202ENST00000411739 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 PCDHA13Q9Y5I0 950 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 GON4LQ3T8J9 2241 aa12.27□□□□□ -0.45
NEDD1-202ENST00000411739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 MAP3K13O43283 966 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 SRPRAP08240 638 aaKnown RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 PTPRZ1P23471 2315 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 PCK1P35558 622 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 OXCT1P55809 520 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 SLC25A11Q02978 314 aaKnown RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 ACBD5Q5T8D3 534 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 Q6ZVU0 165 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 MMAAQ8IVH4 418 aaKnown RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 TP53INP2Q8IXH6 220 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 TMEFF1Q8IYR6 380 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 RTL3Q8N8U3 475 aaKnown RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 ACRBPQ8NEB7 543 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 OR2T3Q8NH03 318 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-202ENST00000411739 TNKS2Q9H2K2 1166 aa12.26□□□□□ -0.45
NEDD1-202ENST00000411739 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms