RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 IGLV4-60A0A075B6I1 120 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 A0A0U1RQK1 487 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 A0A1B0GWB2 263 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 A0A1W2PQ72 361 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZFP92A6NM28 416 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 HAS3O00219 553 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 CLGNO14967 610 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 MSCO60682 206 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZBED4O75132 1171 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 CD8AP01732 235 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PRM1P04553 51 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 RNH1P13489 461 aaKnown RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 CRISP2P16562 243 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ITGALP20701 1170 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 MDKP21741 143 aaPredicted RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 SLC6A2P23975 617 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 MST1P26927 711 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 NBL1P41271 181 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 IER3P46695 156 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PPOXP50336 477 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PFN3P60673 137 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 SP2Q02086 613 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 CLCQ05315 142 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 MBTD1Q05BQ5 628 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZBTB17Q13105 803 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 GPS2Q13227 327 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PDE7AQ13946 482 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 SERTAD2Q14140 314 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 HLXQ14774 488 aaPredicted RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ENOX2Q16206 610 aaKnown RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PRSS53Q2L4Q9 553 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 VWC2Q2TAL6 325 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZFP69Q49AA0 526 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM63BQ5T3F8 832 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 DENND5AQ6IQ26 1287 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PHLDB3Q6NSJ2 640 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 C8orf82Q6P1X6 216 aaPredicted RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 UNC5AQ6ZN44 842 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 GK5Q6ZS86 529 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZBTB49Q6ZSB9 765 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 KIAA1328Q86T90 577 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ADAMTSL2Q86TH1 951 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 GPD1LQ8N335 351 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 EFHBQ8N7U6 833 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 C15orf56Q8N910 161 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ATP11CQ8NB49 1132 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 KLHL30-AS1Q8NEE0 82 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 OR4K1Q8NGD4 311 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 NUP133Q8WUM0 1156 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PLAC4Q8WY50 150 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 EME1Q96AY2 570 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PTERQ96BW5 349 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 CMTM5Q96DZ9 223 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ZNF560Q96MR9 790 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 C16orf70Q9BSU1 422 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 SCNM1Q9BWG6 230 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 TPSD1Q9BZJ3 242 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 CIPCQ9C0C6 399 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 IFT122Q9HBG6 1241 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 ANO2Q9NQ90 1003 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 GPR27Q9NS67 375 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 STAU2Q9NUL3 570 aaKnown RBP eCLIP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 SPG7Q9UQ90 795 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 MRVI1Q9Y6F6 885 aa-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 PRKDCP78527 4128 aaKnown RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 TNKS1BP1Q9C0C2 1729 aaKnown RBP-1.38□□□□□ -2.63
RNU4-88P-201ENST00000411220 VPS13BQ7Z7G8 4022 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SOWAHDA6NJG2 315 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 RASSF10A6NK89 507 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 RGS14O43566 566 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 FKBP6O75344 327 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 TMEM63AO94886 807 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 POMCP01189 267 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 MT1BP07438 61 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 RETP07949 1114 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ITGA2BP08514 1039 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 LINC00271P0C7V0 271 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 IL9P15248 144 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 CELP19835 753 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 AMY2BP19961 511 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 KCNA5P22460 613 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 CDH5P33151 784 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 RXRGP48443 463 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 EFNA3P52797 238 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 B3GALT5-AS1P59052 145 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 LILRA4P59901 499 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 YPEL5P62699 121 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 GPSM2P81274 684 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ROR1Q01973 937 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 FMODQ06828 376 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ADCY2Q08462 1091 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SRSF6Q13247 344 aaKnown RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 KLF1Q13351 362 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 GPR19Q15760 415 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 ASB16-AS1Q495Z4 193 aa-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 KLF17Q5JT82 389 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 SPOUT1Q5T280 376 aaKnown RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 N4BP2L1Q5TBK1 243 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-88P-201ENST00000411220 AGBL2Q5U5Z8 902 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms