RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 BARGINQ6ZT62 677 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 USP49Q70CQ1 688 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ADAM2Q99965 735 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF214Q9UL59 606 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 KIAA1257Q9ULG3 409 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SCN2BO60939 215 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 KRT6AP02538 564 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 KRT6BP04259 564 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CES1P23141 567 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 EIF4BP23588 611 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SERPINA4P29622 427 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ADSLP30566 484 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 KRT6CP48668 564 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ANTXR2P58335 489 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 RAP1GAP2Q684P5 730 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CCSAPQ6IQ19 270 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ATG4AQ8WYN0 398 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CCSER1Q9C0I3 900 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 DSN1Q9H410 356 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 PCDH12Q9NPG4 1184 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 INTS10Q9NVR2 710 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 NKRFO15226 690 aaKnown RBP eCLIP11.41□□□□□ -0.589e-6■□□□□ 8.3
PRPF40A-202ENST00000410080 ATP5F1P24539 256 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CNSTQ6PJW8 725 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CD302Q8IX05 232 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 FBXO36Q8NEA4 188 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MTFR1LQ9H019 292 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 THAP2Q9H0W7 228 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 EFCAB1Q9HAE3 211 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 PSME2Q9UL46 239 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 C1QTNF3-AMACRE9PGA6 284 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 INPP4BO15327 924 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CCL16O15467 120 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 RAD51CO43502 376 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 PSEN2P49810 448 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SRP54P61011 504 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SNRPFP62306 86 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SNRPD1P62314 119 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 C2orf73Q8N5S3 287 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ALLCQ8N6M5 410 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CCDC54Q8NEL0 328 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 RELTQ969Z4 430 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 GPER1Q99527 375 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CCDC177Q9NQR7 707 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SNX12Q9UMY4 172 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC9A3R1O14745 358 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MFN2O95140 757 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MATN4O95460 622 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 HSD17B3P37058 310 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 POLD2P49005 469 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 FAM98BQ52LJ0 330 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF473Q8WTR7 871 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 EPS8L2Q9H6S3 715 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 DNTTP04053 509 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 AKR1A1P14550 325 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF37AP17032 561 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 PAGE2BQ5JRK9 111 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CAMK1DQ8IU85 385 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC9A6Q92581 669 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 TBL1YQ9BQ87 522 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 DNMT3LQ9UJW3 386 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 COG5Q9UP83 839 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 ANGPT4Q9Y264 503 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 INVSQ9Y283 1065 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CDK5RAP2Q96SN8 1893 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 MAPK11Q15759 364 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 SYT12Q8IV01 421 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 RAD51AP1Q96B01 352 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM79Q9BSE2 394 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 RIBC2Q9H4K1 309 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 UBA2Q9UBT2 640 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 MROH7Q68CQ1 1323 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 MED24O75448 989 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 MDH1P40925 334 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 RAB27AP51159 221 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 HNRNPH2P55795 449 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 PDPK2PQ6A1A2 396 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 RBM12Q9NTZ6 932 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 ARHGAP28Q9P2N2 729 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 STK39Q9UEW8 545 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 MPP3Q13368 585 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 KRR1Q13601 381 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC29A2Q14542 456 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CYP2A13Q16696 494 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 TCHHL1Q5QJ38 904 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 PANX3Q96QZ0 392 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CAB39LQ9H9S4 337 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 CNTNAP4Q9C0A0 1308 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 MED14O60244 1454 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 URADA6NGE7 173 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 PTGES3LE9PB15 166 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 NEDD8-MDP1E9PL57 170 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 RGS14O43566 566 aa11.4□□□□□ -0.58
PRPF40A-202ENST00000410080 COILP38432 576 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms