RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 GSCP56915 257 aaPredicted RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 CDO1Q16878 200 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 KLHL40Q2TBA0 621 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 TTC31Q49AM3 519 aaPredicted RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 N4BP2L1Q5TBK1 243 aaPredicted RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 LRRC31Q6UY01 552 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 USP30Q70CQ3 517 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 MON1BQ7L1V2 547 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 TFAP2DQ7Z6R9 452 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 ZCCHC9Q8N567 271 aaKnown RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 CENPIQ92674 756 aaPredicted RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 PPP1R9BQ96SB3 815 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 PSMB7Q99436 277 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 SYT11Q9BT88 431 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 SEPT11Q9NVA2 429 aaKnown RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 FBXL12Q9NXK8 326 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 ZNF212Q9UDV6 495 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 SUSD2Q9UGT4 822 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 SCML1Q9UN30 329 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 NYNRINQ9P2P1 1898 aaKnown RBP18.18■□□□□ 0.5
LSM5-204ENST00000409909 CEP295Q9C0D2 2601 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 A0A1B0GTW7 788 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 TCRBV5S1A1TA0A578 114 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 SYCE3A1L190 88 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 ATP9BO43861 1147 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 KRT3P12035 628 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 FERP16591 822 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 SDC4P31431 198 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 SLC8A1P32418 973 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 ADRA1BP35368 520 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 NNMTP40261 264 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 PTPN9P43378 593 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 ACBD5Q5T8D3 534 aaPredicted RBP18.18■□□□□ 0.5
LSM5-204ENST00000409909 PSAPL1Q6NUJ1 521 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 MINDY1Q8N5J2 469 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 AADATQ8N5Z0 425 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 GANCQ8TET4 914 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 MAGEB5Q9BZ81 275 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 MUC3BQ9H195 1237 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 NEUROG2Q9H2A3 272 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 SGK2Q9HBY8 427 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 NCKAP1Q9Y2A7 1128 aa18.18■□□□□ 0.5
LSM5-204ENST00000409909 TPRP12270 2363 aaKnown RBP18.18■□□□□ 0.5
LSM5-204ENST00000409909 A0A0D9SEW6 157 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 A0A1B0GTH6 734 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 A0A1W2PP55 124 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
LSM5-204ENST00000409909 SNAP91O60641 907 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 MT-CO1P00395 513 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 CALB1P05937 261 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 RHOCP08134 193 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 SYPP08247 313 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 PSMD8P48556 350 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 NOVA1P51513 510 aaKnown RBP18.17■□□□□ 0.5
LSM5-204ENST00000409909 ATXN3P54252 364 aaPredicted RBP18.17■□□□□ 0.5
LSM5-204ENST00000409909 HDAC4P56524 1084 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 BNC1Q01954 994 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
LSM5-204ENST00000409909 ELAVL3Q14576 367 aaKnown RBP18.17■□□□□ 0.5
LSM5-204ENST00000409909 DLG2Q15700 870 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 WDR59Q6PJI9 974 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 SETD3Q86TU7 594 aaPredicted RBP18.17■□□□□ 0.5
LSM5-204ENST00000409909 SH2D3CQ8N5H7 860 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 C3orf20Q8ND61 904 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 SNX19Q92543 992 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 BIRC7Q96CA5 298 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 TAS2R14Q9NYV8 317 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 VPS51Q9UID3 782 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 SLC25A13Q9UJS0 675 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 MYO6Q9UM54 1294 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 PCNX2A6NKB5 2137 aa18.17■□□□□ 0.5
LSM5-204ENST00000409909 ACACBO00763 2458 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 LRRC53A6NM62 1247 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 SIGLEC16A6NMB1 481 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 FAM72CH0Y354 149 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 GJB3O75712 270 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 RNASEH2AO75792 299 aaKnown RBP18.16■□□□□ 0.5
LSM5-204ENST00000409909 FSBPO95073 299 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 IGHV4-34P06331 123 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 CSRP1P21291 193 aaKnown RBP18.16■□□□□ 0.5
LSM5-204ENST00000409909 OR1E1P30953 314 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 METAP1P53582 386 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 GALCP54803 685 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 GRIK2Q13002 908 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 SEMA3BQ13214 749 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 NR1I3Q14994 352 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 ACCSLQ4AC99 568 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 FILIP1LQ4L180 1135 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 FAM72AQ5TYM5 149 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 ACAD10Q6JQN1 1059 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 FAM72DQ6L9T8 149 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 STRADAQ7RTN6 431 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 FAM72BQ86X60 149 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 FAM172AQ8WUF8 416 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 OMDQ99983 421 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 ORAI3Q9BRQ5 295 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 SELENOOQ9BVL4 669 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 CBX8Q9HC52 389 aa18.16■□□□□ 0.5
LSM5-204ENST00000409909 DNAAF2Q9NVR5 837 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms