RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PRDM12Q9H4Q4 367 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 RABEP2Q9H5N1 569 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 TMLHEQ9NVH6 421 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 COMMD8Q9NX08 183 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 ARHGEF38Q9NXL2 777 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 DONSONQ9NYP3 566 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 COX16Q9P0S2 106 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 OR12D3Q9UGF7 316 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 FOXD3Q9UJU5 478 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 PCDHB7Q9Y5E2 793 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 NLRC5Q86WI3 1866 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 SDR42E2A6NKP2 422 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MYO1CO00159 1063 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 PSMD3O43242 534 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TYROBPO43914 113 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TADA2AO75478 443 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 BANF1O75531 89 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 KRT37O76014 449 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 DDHD2O94830 711 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MAP3K6O95382 1288 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ASMTLO95671 621 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ITGB1P05556 798 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SLC2A3P11169 496 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CREB1P16220 341 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 PCSK2P16519 638 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CA4P22748 312 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CNTFP26441 200 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 HOXC13P31276 330 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CCR1P32246 355 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 GRIK1P39086 918 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 OR1G1P47890 313 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 IFNAR2P48551 515 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SERPINB9P50453 376 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ARSDP51689 593 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 NRLP54845 237 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 GALNT2Q10471 571 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 WASHC5Q12768 1159 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 IFRD2Q12894 506 aaPredicted RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 KBTBD12Q3ZCT8 623 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 PLEKHG4Q58EX7 1191 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TTC39BQ5VTQ0 682 aaPredicted RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 STEAP4Q687X5 459 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 NUGGCQ68CJ6 796 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ZNF280DQ6N043 979 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ZNF534Q76KX8 674 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TAC4Q86UU9 113 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MON1AQ86VX9 555 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ZNF280BQ86YH2 543 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 FAM126BQ8IXS8 530 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 LRRC34Q8IZ02 419 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TAB3Q8N5C8 712 aaPredicted RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ANKRD42Q8N9B4 389 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CCNYQ8ND76 341 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 HASPINQ8TF76 798 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MZB1Q8WU39 189 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 RNF34Q969K3 372 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SIGLEC10Q96LC7 697 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CEP295NLQ96MC4 621 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SERPINB11Q96P15 392 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 LGMNQ99538 433 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CATSPERBQ9H7T0 1116 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SCML2Q9UQR0 700 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SCAMP3O14828 347 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SNX3O60493 162 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TNFRSF21O75509 655 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 KRT38O76015 456 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ALDH1A2O94788 518 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 LRIG2O94898 1065 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SUN1O94901 812 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MT-ND3P03897 115 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SNRPAP09012 282 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 KRT4P19013 534 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 EPHB2P29323 1055 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 GARSP41250 739 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 DNAJC3Q13217 504 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MPP2Q14168 576 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 FRG1Q14331 258 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SEPT7Q16181 437 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 PDK4Q16654 411 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 SLC39A12Q504Y0 691 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 FAXCQ5TGI0 409 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MSANTD2Q6P1R3 559 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 XKR5Q6UX68 686 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CCDC121Q6ZUS5 278 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 DENND5BQ6ZUT9 1274 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 IGDCC3Q8IVU1 814 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ZNF567Q8N184 647 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 NUP93Q8N1F7 819 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MGARPQ8TDB4 240 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 C2orf15Q8WU43 125 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 CDKL2Q92772 493 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TTC17Q96AE7 1141 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 STAMBPL1Q96FJ0 436 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TSGA13Q96PP4 275 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TGS1Q96RS0 853 aaKnown RBP7.68□□□□□ -1.18
CXCR4-202ENST00000409817 TMEM175Q9BSA9 504 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 MAGEB5Q9BZ81 275 aa7.68□□□□□ -1.18
CXCR4-202ENST00000409817 ACTR5Q9H9F9 607 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms