RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DMDP11532 3685 aa11.19□□□□□ -0.62
CHMP3-205ENST00000409810 PIEZO1Q92508 2521 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 EDDM13A0A1B0GTR0 161 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 TARSL2A2RTX5 802 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 PRR23AA6NEV1 266 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 FAM72CH0Y354 149 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 EEF2KO00418 725 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 HRO43593 1189 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 GFRA3O60609 400 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RAMP2O60895 175 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RNASEH1O60930 286 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RHOBTB1O94844 696 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 NDUFV2P19404 249 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 MAN1A1P33908 653 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 CTSOP43234 321 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 CLCN6P51797 869 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 GEMIN4P57678 1058 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 GNA12Q03113 381 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 SFSWAPQ12872 951 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 ELF2Q15723 593 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 HNRNPA1L2Q32P51 320 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 TTC31Q49AM3 519 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 FAM72AQ5TYM5 149 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 IL31Q6EBC2 164 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 LAIR1Q6GTX8 287 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 FAM72DQ6L9T8 149 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RETSATQ6NUM9 610 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 NLRP14Q86W24 1093 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 FAM72BQ86X60 149 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 PYROXD2Q8N2H3 581 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RTL3Q8N8U3 475 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RFFLQ8WZ73 363 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 PRCCQ92733 491 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 ALG14Q96F25 216 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 SIPA1Q96FS4 1042 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 MYO19Q96H55 970 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 BTBD6Q96KE9 485 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 MRGPRX3Q96LB0 322 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 PEBP4Q96S96 227 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 HINFPQ9BQA5 517 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 PRDM16Q9HAZ2 1276 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 CD248Q9HCU0 757 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 ATP13A1Q9HD20 1204 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 ZNF212Q9UDV6 495 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 HPCAL4Q9UM19 191 aa11.18□□□□□ -0.62
CHMP3-205ENST00000409810 RIF1Q5UIP0 2472 aaKnown RBP11.18□□□□□ -0.62
CHMP3-205ENST00000409810 OTOGLQ3ZCN5 2332 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 A0A0D9SEW6 157 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 CXorf51AA0A1B0GTR3 108 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 WASH4PA8MWX3 477 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 H3BRJ5 948 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 DAPK3O43293 454 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 PROSCO94903 275 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 LCA5LO95447 670 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 FECHP22830 423 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ARL4AP40617 200 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 P2RY2P41231 377 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ARHGAP25P42331 645 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SSR1P43307 286 aaKnown RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 MRE11P49959 708 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ZBTB16Q05516 673 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SLC20A2Q08357 652 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SEMA3BQ13214 749 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SRSF5Q13243 272 aaKnown RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ACCSLQ4AC99 568 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 PPP6R3Q5H9R7 873 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SLC36A4Q6YBV0 504 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 METTL3Q86U44 580 aaKnown RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ZNF354CQ86Y25 554 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 TMPRSS6Q8IU80 811 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ARFGAP1Q8N6T3 406 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ZNF366Q8N895 744 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 OR7D4Q8NG98 312 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 OR52K2Q8NGK3 314 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 TEKT4Q8WW24 435 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 ERLEC1Q96DZ1 483 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 RPL10LQ96L21 214 aaKnown RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 PSMB7Q99436 277 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SPON2Q9BUD6 331 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 PRSS16Q9NQE7 514 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 GPATCH2LQ9NWQ4 482 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 NCDNQ9UBB6 729 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 DNAI1Q9UI46 699 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 VPS51Q9UID3 782 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 SCML1Q9UN30 329 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 NEU3Q9UQ49 428 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 HS3ST2Q9Y278 367 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 OR51B4Q9Y5P0 310 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 USP34Q70CQ2 3546 aa11.17□□□□□ -0.62
CHMP3-205ENST00000409810 PTPRZ1P23471 2315 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-205ENST00000409810 GON4LQ3T8J9 2241 aa11.16□□□□□ -0.62
CHMP3-205ENST00000409810 ZSCAN5CA6NGD5 496 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms