RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IRGCQ6NXR0 463 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 GPSM1Q86YR5 675 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SMYD1Q8NB12 490 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 OR5M3Q8NGP4 307 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SNRNP27Q8WVK2 155 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 A1CFQ9NQ94 594 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 A0A096LPK6 155 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SAC3D1A6NKF1 404 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 KCNA3P22001 575 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 HPCAL1P37235 193 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 PPIL2Q13356 520 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 C6orf62Q9GZU0 229 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 INVSQ9Y283 1065 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SHANK2Q9UPX8 1470 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 GAKO14976 1311 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 IRF6O14896 467 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 DBIP07108 87 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TLX1P31314 330 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 FLT3LGP49771 235 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 NT5C2P49902 561 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CCINQ13939 588 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ZC3H12AQ5D1E8 599 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TMEM26Q6ZUK4 368 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 FBXO39Q8N4B4 442 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SH3GL3Q99963 347 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TTLL2Q9BWV7 592 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 MRPL9Q9BYD2 267 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SPHKAPQ2M3C7 1700 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KANSL1LA0AUZ9 987 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CFAP73A6NFT4 308 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SMIM10L2AP0DMW4 78 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SMIM10L2BP0DMW5 78 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SNRPD1P62314 119 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 MC1RQ01726 317 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 MPP3Q13368 585 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 RABL6Q3YEC7 729 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 FAM151BQ6UXP7 276 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TCF25Q9BQ70 676 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TBL1YQ9BQ87 522 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PRG2P13727 222 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF7P17097 686 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 MMP13P45452 471 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 DGKEP52429 567 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ERVK-21P61565 698 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SEMG2Q02383 582 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PRKG2Q13237 762 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 NOMO2Q5JPE7 1267 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 RASSF6Q6ZTQ3 369 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CATSPER1Q8NEC5 780 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 POMKQ9H5K3 350 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KHDRBS3O75525 346 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SLC25A14O95258 325 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CYP11B1P15538 503 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 NAB2Q15742 525 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 FBXO15Q8NCQ5 510 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 METTL6Q8TCB7 284 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 OSBPL3Q9H4L5 887 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TBC1D13Q9NVG8 400 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 HEY2Q9UBP5 337 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 DCDC2Q9UHG0 476 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 C1orf232A0A0U1RR37 186 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 RHPN2P1A8MT19 583 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PEX10O60683 326 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 BUD31P41223 144 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PDZK1Q5T2W1 519 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PCNX4Q63HM2 1172 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF470Q6ECI4 717 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 NPNTQ6UXI9 565 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 GPC2Q8N158 579 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PROX1Q92786 737 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 RIT2Q99578 217 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KCNN2Q9H2S1 579 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ING3Q9NXR8 418 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ASF1AQ9Y294 204 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF780BQ9Y6R6 833 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KRT75O95678 551 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 EPHX1P07099 455 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TALDO1P37837 337 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PGDP52209 483 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 OC90Q02509 493 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 NDUFAF6Q330K2 333 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SRLQ86TD4 932 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ZFPM1Q8IX07 1006 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TRPM4Q8TD43 1214 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TAS1R2Q8TE23 839 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ALDH8A1Q9H2A2 487 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CD3EAPO15446 510 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 FGBP02675 491 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ADH1AP07327 375 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 MSX1P28360 303 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 HSD17B3P37058 310 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SKP1P63208 163 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 PFKFB4Q16877 469 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 WLSQ5T9L3 541 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms