RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SGSHP51688 502 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 MTAPQ13126 283 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 CDH18Q13634 790 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 ALFQ53S48 1182 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 ARTNQ5T4W7 220 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 C6orf118Q5T5N4 469 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 KAZNQ674X7 775 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 RNF43Q68DV7 783 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 SLC9A4Q6AI14 798 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 SETD3Q86TU7 594 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 MFN1Q8IWA4 741 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 PCDH19Q8TAB3 1148 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 MAIP1Q8WWC4 291 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 ZNF592Q92610 1267 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 ATOH1Q92858 354 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 BHMTQ93088 406 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 MYEOVQ96EZ4 313 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 SLC2A11Q9BYW1 496 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 CACNG3O60359 315 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 CST8O60676 142 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 KRT10P13645 584 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 ETFBP38117 255 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 IRAK1P51617 712 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 PREPLQ4J6C6 727 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 BBS12Q6ZW61 710 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 TFAP2DQ7Z6R9 452 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 CIR1Q86X95 450 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 CARNMT1Q8N4J0 409 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 FIBINQ8TAL6 211 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 PLK2Q9NYY3 685 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 RNF14Q9UBS8 474 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 FBXO4Q9UKT5 387 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 TTC7AQ9ULT0 858 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 TBC1D30Q9Y2I9 924 aa16.95■□□□□ 0.3
TSPAN4-208ENST00000409531 FANCGO15287 622 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 TGM2P21980 687 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 OPRD1P41143 372 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 YBEYP58557 167 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 SLC12A1Q13621 1099 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 GAS6Q14393 721 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 FBXO43Q4G163 708 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 NAIF1Q69YI7 327 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 AADACL2Q6P093 401 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 ZNF783Q6ZMS7 281 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 BZW1Q7L1Q6 419 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 SLC13A5Q86YT5 568 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 MAML2Q8IZL2 1156 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 UMODL1-AS1Q8N2C9 162 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 RASGEF1CQ8N431 466 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 SPEM1Q8N4L4 309 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 PQLC3Q8N755 202 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 TTC13Q8NBP0 860 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 HEMGNQ9BXL5 484 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 ZNF212Q9UDV6 495 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 RAD54BQ9Y620 910 aa16.94■□□□□ 0.3
TSPAN4-208ENST00000409531 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 ILVBLA1L0T0 632 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 APOC4-APOC2K7ER74 178 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 PGRMC1O00264 195 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 EGFP01133 1207 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 APOC2P02655 101 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 FGGP02679 453 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 RHOCP08134 193 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 EIF2DP41214 584 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 CXCL12P48061 93 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 NR2C2P49116 596 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 NDST2P52849 883 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 DYNLT1P63172 113 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 NCBP2-AS2Q69YL0 99 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 PLD5Q8N7P1 536 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 ACTRT1Q8TDG2 376 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 COG1Q8WTW3 980 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 P3H4Q92791 437 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 MAGEH1Q9H213 219 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 ETNK2Q9NVF9 386 aa16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 KIAA1522Q9P206 1035 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-208ENST00000409531 RAMP2O60895 175 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 URI1O94763 535 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 SP9P0CG40 484 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 MX2P20592 715 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 PAFAH1B1P43034 410 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 SLC6A11P48066 632 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 DGKGP49619 791 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 CCR3P51677 355 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 LONRF2Q1L5Z9 754 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 ZNF528Q3MIS6 628 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 PARP15Q460N3 678 aa16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 DNTTIP2Q5QJE6 756 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-208ENST00000409531 Q6ZS52 159 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms