RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PCDHA13Q9Y5I0 950 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 DMDP11532 3685 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 RIF1Q5UIP0 2472 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 FANCMQ8IYD8 2048 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 FGF10O15520 208 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 HRO43593 1189 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 IPO7O95373 1038 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 MAN1A1P33908 653 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 ETFBP38117 255 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 NNMTP40261 264 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 ARHGAP25P42331 645 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 NUMBP49757 651 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 TPI1P60174 286 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 KRT83P78385 493 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 SLC25A11Q02978 314 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 GNA12Q03113 381 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 HNRNPA1L2Q32P51 320 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 KCNT1Q5JUK3 1230 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 DCAF4L2Q8NA75 395 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 TEKT4Q8WW24 435 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 ERLEC1Q96DZ1 483 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 KCTD15Q96SI1 283 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 PSMB7Q99436 277 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 PHOX2BQ99453 314 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 ZWILCHQ9H900 591 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 NDFIP2Q9NV92 336 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 DONSONQ9NYP3 566 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 DNAI1Q9UI46 699 aa20.35■□□□□ 0.85
PDLIM2-207ENST00000409417 WASH4PA8MWX3 477 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 EEF2KO00418 725 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 NDUFV2P19404 249 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 HCAR3P49019 387 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 GSDMDP57764 484 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 DPYSL2Q16555 572 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 HADHQ16836 314 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 SMTNL2Q2TAL5 461 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 USP39Q53GS9 565 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 PPP6R3Q5H9R7 873 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 TMEM139Q8IV31 216 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 PGBD3Q8N328 593 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 ZNF366Q8N895 744 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 OR7D4Q8NG98 312 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 GAB3Q8WWW8 586 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 MRGPRX1Q96LB2 322 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 MKRN2Q9H000 416 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 MAGEH1Q9H213 219 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 EPC1Q9H2F5 836 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 VPS51Q9UID3 782 aa20.34■□□□□ 0.85
PDLIM2-207ENST00000409417 GOLGA6L3A6NEY3 463 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 TTC34A8MYJ7 566 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 SNAP91O60641 907 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 RAMP2O60895 175 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 RPP40O75818 363 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 RARAP10276 462 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 SSR1P43307 286 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 STK19P49842 368 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 TXNRD3NBQ6F5E7 133 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 RAD9BQ6WBX8 426 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 RFX8Q6ZV50 586 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 NKD2Q969F2 451 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 SPON2Q9BUD6 331 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 TPSD1Q9BZJ3 242 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 FBRSQ9HAH7 460 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 GRPEL1Q9HAV7 217 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 PRSS16Q9NQE7 514 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 SLC25A13Q9UJS0 675 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 HS3ST2Q9Y278 367 aa20.33■□□□□ 0.85
PDLIM2-207ENST00000409417 MUC22E2RYF6 1773 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 GOT1P17174 413 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 SRSF5Q13243 272 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 MESDQ14696 234 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 TMPRSS6Q8IU80 811 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 UMODL1-AS1Q8N2C9 162 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 OR2T3Q8NH03 318 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 HSPH1Q92598 858 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 FAM122AQ96E09 287 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 ACE2Q9BYF1 805 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 ATP13A1Q9HD20 1204 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 CWC15Q9P013 229 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 CKAP5Q14008 2032 aa20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 EP300Q09472 2414 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-207ENST00000409417 EDDM13A0A1B0GTR0 161 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 CXorf51AA0A1B0GTR3 108 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 TARSL2A2RTX5 802 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 CBX4O00257 560 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 DAPK3O43293 454 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 ATP9BO43861 1147 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 ZMPSTE24O75844 475 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 C7P10643 843 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 PLA2G5P39877 138 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 COPAP53621 1224 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 SLC20A2Q08357 652 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 POLD3Q15054 466 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 IL31Q6EBC2 164 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 RETSATQ6NUM9 610 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 CPNE8Q86YQ8 564 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 FRS2Q8WU20 508 aa20.31■□□□□ 0.84
PDLIM2-207ENST00000409417 ARHGEF2Q92974 986 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms