RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MIGA2Q7L4E1 593 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 SPATA24Q86W54 205 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 FAM186BQ8IYM0 893 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ADSSL1Q8N142 457 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 KIF2BQ8N4N8 673 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 RAET1EQ8TD07 263 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 SCFD2Q8WU76 684 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 NAT14Q8WUY8 206 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 TIFAQ96CG3 184 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 C1GALT1C1Q96EU7 318 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ZNF184Q99676 751 aaPredicted RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 ACO2Q99798 780 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 PRMT1Q99873 361 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 TUBGCP2Q9BSJ2 902 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DDX23Q9BUQ8 820 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 SPZ1Q9BXG8 430 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 KATNBL1Q9H079 304 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DPH5Q9H2P9 285 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 CD320Q9NPF0 282 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 SAR1AQ9NR31 198 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 RHBDL2Q9NX52 303 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DNAJB4Q9UDY4 337 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DBNLQ9UJU6 430 aaKnown RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 USH1CQ9Y6N9 552 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 DUSP10Q9Y6W6 482 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 UMODL1Q5DID0 1318 aa5.68□□□□□ -1.5
CLK1-202ENST00000409403 FRMPD2Q68DX3 1309 aaPredicted RBP5.68□□□□□ -1.5
CLK1-202ENST00000409403 LRRC37AA6NMS7 1700 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 FAM208BQ5VWN6 2430 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 TCAF2A6NFQ2 919 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 CYSRT1A8MQ03 144 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 A8MXQ7 604 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 RFXAPO00287 272 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 ZNF213O14771 459 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 NDC80O14777 642 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 PRAMEF4O60810 478 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 CAMTA2O94983 1202 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 AFPP02771 609 aaKnown RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 LYNP07948 512 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 LTA4HP09960 611 aaKnown RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 ALOX15P16050 662 aaPredicted RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 PORP16435 677 aaPredicted RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 IFNAR1P17181 557 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 PTPN4P29074 926 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 MEOX1P50221 254 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 DRG2P55039 364 aaKnown RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 MTTPP55157 894 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 ADARP55265 1226 aaKnown RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 XIAPP98170 497 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 NEXNQ0ZGT2 675 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 DHX34Q14147 1143 aaKnown RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 BTG3Q14201 252 aaPredicted RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 NOMO1Q15155 1222 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 CCDC153Q494R4 210 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 MFSD4BQ5TF39 518 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 SNX30Q5VWJ9 437 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 GALNT17Q6IS24 598 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 APOA5Q6Q788 366 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 LRRC74BQ6ZQY2 392 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 ARHGEF18Q6ZSZ5 1173 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 TMTC3Q6ZXV5 915 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 SGMS1Q86VZ5 419 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 KLHL7Q8IXQ5 586 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 SYCE1Q8N0S2 351 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 CAMKK1Q8N5S9 505 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 MDM1Q8TC05 714 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 SUCLG2Q96I99 432 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 FAM193BQ96PV7 902 aaPredicted RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 PPP1R16BQ96T49 567 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 ANKRD2Q9GZV1 360 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 ZCWPW1Q9H0M4 648 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 TMEM168Q9H0V1 697 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 CUEDC2Q9H467 287 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 SYNCQ9H7C4 482 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 TLE6Q9H808 572 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 GOLGA2P5Q9HBQ8 144 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 NKIRAS1Q9NYS0 192 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 EHD2Q9NZN4 543 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 NKX1-2Q9UD57 310 aaPredicted RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 SEC63Q9UGP8 760 aaKnown RBP5.67□□□□□ -1.5
CLK1-202ENST00000409403 SRRDQ9UH36 339 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 LNPEPQ9UIQ6 1025 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 CHMP2BQ9UQN3 213 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 MAST3O60307 1309 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 RTL9Q8NET4 1388 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 COL4A1P02462 1669 aa5.67□□□□□ -1.5
CLK1-202ENST00000409403 A0A0J9YVX5 310 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ARHGAP10A1A4S6 786 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 SH3D21A4FU49 640 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 ZSCAN5CA6NGD5 496 aaPredicted RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 SIGLEC16A6NMB1 481 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 TCP11X1B4DZS4 312 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 IPO5O00410 1097 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 P4HA2O15460 535 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 HNRNPRO43390 633 aaKnown RBP5.66□□□□□ -1.5
CLK1-202ENST00000409403 NCK2O43639 380 aa5.66□□□□□ -1.5
CLK1-202ENST00000409403 PHF2O75151 1096 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms