RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 GNA13Q14344 377 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 SNCBQ16143 134 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 UAP1L1Q3KQV9 507 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 PLA2G4EQ3MJ16 856 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 BEND6Q5SZJ8 279 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-203ENST00000409101 PDE12Q6L8Q7 609 aaKnown RBP5.11□□□□□ -1.59
SCN3A-203ENST00000409101 C16orf89Q6UX73 402 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 RGS9BPQ6ZS82 235 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 RIBC1Q8N443 379 aaPredicted RBP5.11□□□□□ -1.59
SCN3A-203ENST00000409101 HEXDCQ8WVB3 486 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 HMGB4Q8WW32 186 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 UBE2E3Q969T4 207 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 ACBD6Q9BR61 282 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 TMEM121Q9BTD3 319 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 TRIT1Q9H3H1 467 aaKnown RBP5.11□□□□□ -1.59
SCN3A-203ENST00000409101 NMRAL1Q9HBL8 299 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 AURKCQ9UQB9 309 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 PCDHGA4Q9Y5G9 962 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 SNX5Q9Y5X3 404 aa5.11□□□□□ -1.59
SCN3A-203ENST00000409101 XRN1Q8IZH2 1706 aaKnown RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 C1orf232A0A0U1RR37 186 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 RNF103-CHMP3A0A140T963 221 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ISM1B1AKI9 464 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 INPP4BO15327 924 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CATP04040 527 aaKnown RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 FGRP09769 529 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 MIPP30301 263 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 RFC1P35251 1148 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TRPC1P48995 793 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 C16orf72Q14CZ0 275 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ZNHIT3Q15649 155 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 GSTA3Q16772 222 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 NT5DC1Q5TFE4 455 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 PDPK2PQ6A1A2 396 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CRTC3Q6UUV7 619 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 AGMOQ6ZNB7 445 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ZNF571Q7Z3V5 609 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SETD3Q86TU7 594 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 GPR135Q8IZ08 494 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 C4orf33Q8N1A6 199 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CELF5Q8N6W0 485 aaKnown RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ARL14EPQ8N8R7 260 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CXorf38Q8TB03 319 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ZSCAN18Q8TBC5 510 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 WFIKKN2Q8TEU8 576 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 BTN2A2Q8WVV5 523 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ATG4AQ8WYN0 398 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 BTN2A3PQ96KV6 586 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 RASSF4Q9H2L5 321 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ENTPD4Q9Y227 616 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 DNAJC16Q9Y2G8 782 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 FAM208AQ9UK61 1670 aaKnown RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 A0A1B0GUA9 196 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 WDR27A2RRH5 827 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TRIM49D1C9J1S8 452 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ANXA6P08133 673 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 COL6A1P12109 1028 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 UQCRBP14927 111 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CDH2P19022 906 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ATP6V1C1P21283 382 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SLC8A1P32418 973 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ARL2P36404 184 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 KCNJ1P48048 391 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SLC5A3P53794 718 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CBX2Q14781 532 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ZNF792Q3KQV3 632 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 GRAMD1BQ3KR37 738 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TMEM259Q4ZIN3 620 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 WDR45BQ5MNZ6 344 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 GRTP1Q5TC63 336 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 C11orf63Q6NUN7 778 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ESRP1Q6NXG1 681 aaKnown RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 VITQ6UXI7 678 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SLC39A5Q6ZMH5 540 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 KCNMB4Q86W47 210 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SLC44A2Q8IWA5 706 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 BBS7Q8IWZ6 715 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TTC29Q8NA56 475 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 IRGQQ8WZA9 623 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TADA1Q96BN2 335 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TUBGCP3Q96CW5 907 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 IL12RB2Q99665 862 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 LRRC1Q9BTT6 524 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 AGXT2Q9BYV1 514 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ARHGAP39Q9C0H5 1083 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 BPIFA1Q9NP55 256 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 ARHGEF4Q9NR80 690 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SPATA6Q9NWH7 488 aaPredicted RBP5.1□□□□□ -1.59
SCN3A-203ENST00000409101 TRPC4Q9UBN4 977 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 NAALADL1Q9UQQ1 740 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 PCDHB11Q9Y5F2 797 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 LTN1O94822 1766 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 NRP1O14786 923 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 VIPP01282 170 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 IFNA14P01570 189 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 SNHG28P0DPA3 235 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 CTPS1P17812 591 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 NTSP30990 170 aa5.1□□□□□ -1.59
SCN3A-203ENST00000409101 GGCXP38435 758 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms