RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SEMA5AQ13591 1074 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 ATP1A4Q13733 1029 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 CARTPTQ16568 116 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 HSF5Q4G112 596 aaPredicted RBP8.5□□□□□ -1.05
SNX13-201ENST00000409076 ARL13AQ5H913 290 aaPredicted RBP8.5□□□□□ -1.05
SNX13-201ENST00000409076 METTL7BQ6UX53 244 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 BNC2Q6ZN30 1099 aaPredicted RBP8.5□□□□□ -1.05
SNX13-201ENST00000409076 ARHGAP36Q6ZRI8 547 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 MARK2Q7KZI7 788 aaKnown RBP8.5□□□□□ -1.05
SNX13-201ENST00000409076 ARHGAP22Q7Z5H3 698 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 CPNE9Q8IYJ1 553 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 ZNF567Q8N184 647 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 RNF139Q8WU17 664 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 NXNL1Q96CM4 212 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 FCRL3Q96P31 734 aaPredicted RBP8.5□□□□□ -1.05
SNX13-201ENST00000409076 KLHL5Q96PQ7 755 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 GORASP1Q9BQQ3 440 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 TMEM79Q9BSE2 394 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 ULBP1Q9BZM6 244 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 ST6GALNAC4Q9H4F1 302 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 NMRAL1Q9HBL8 299 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 FBRSL1Q9HCM7 1045 aaKnown RBP8.5□□□□□ -1.05
SNX13-201ENST00000409076 ARHGEF4Q9NR80 690 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 EURLQ9NYK6 297 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 MPP6Q9NZW5 540 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 SLC2A6Q9UGQ3 507 aa8.5□□□□□ -1.05
SNX13-201ENST00000409076 TTC3P53804 2025 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 A0A088AWK7 358 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ERCC2P18074 760 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 PIK3R1P27986 724 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ARRB2P32121 409 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ETV4P43268 484 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ROR2Q01974 943 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 PLCL1Q15111 1095 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 PPP1R3AQ16821 1122 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 WSCD1Q658N2 575 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 SEL1L3Q68CR1 1132 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ZNF470Q6ECI4 717 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 FSTL4Q6MZW2 842 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 CATSPERGQ6ZRH7 1159 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ILDR2Q71H61 639 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 REPS2Q8NFH8 660 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 PPP2R3CQ969Q6 453 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ZMAT2Q96NC0 199 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 COL16A1Q07092 1604 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 H3BSA7 217 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 TCEA3O75764 348 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ZBTB11O95625 1053 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 POMCP01189 267 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 CYLC2Q14093 348 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 LSM12Q3MHD2 195 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 RARS2Q5T160 578 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 NIPA1Q7RTP0 329 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 MIB1Q86YT6 1006 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 OR52K2Q8NGK3 314 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 FAM110BQ8TC76 370 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 TMIGD2Q96BF3 282 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ILKAPQ9H0C8 392 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 EPS8L2Q9H6S3 715 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 WDR41Q9HAD4 459 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 COPG2Q9UBF2 871 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 EVLQ9UI08 416 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 MDM4O15151 490 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 CHADO15335 359 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 AHCYL1O43865 530 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 SH3BGRLO75368 114 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 BAIAP3O94812 1187 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 KLHL2O95198 593 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 PTPN1P18031 435 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 CHRM3P20309 590 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 CCR3P51677 355 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ACTR3P61158 418 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 CCNIQ14094 377 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 PCLAFQ15004 111 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 R3HDM1Q15032 1099 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 SGO1Q5FBB7 561 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 FSCBQ5H9T9 825 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 ATG14Q6ZNE5 492 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 FAM83AQ86UY5 434 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 TDRPQ86YL5 185 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX13-201ENST00000409076 APPL2Q8NEU8 664 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 FLAD1Q8NFF5 587 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 GABPB2Q8TAK5 448 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 URGCPQ8TCY9 931 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 LRTOMTQ8WZ04 291 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 EZH1Q92800 747 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 DCPSQ96C86 337 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 EXOC2Q96KP1 924 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 TEPSINQ96N21 525 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 NOL11Q9H8H0 719 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 GNEQ9Y223 722 aaKnown RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 PCDHA11Q9Y5I1 949 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
SNX13-201ENST00000409076 SDK1Q7Z5N4 2213 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 SBF2Q86WG5 1849 aa8.49□□□□□ -1.05
SNX13-201ENST00000409076 NUMA1Q14980 2115 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms