RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 TREML1Q86YW5 311 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 ILKAPQ9H0C8 392 aaPredicted RBP16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 TKTL2Q9H0I9 626 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 SDCBP2Q9H190 292 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 SIX4Q9UIU6 781 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 MID2Q9UJV3 735 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 GMNNO75496 209 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 SERPINE1P05121 402 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 SERPINA6P08185 405 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 PSMC3P17980 439 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 AVPR1AP37288 418 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 CDK7P50613 346 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 KLF1Q13351 362 aaPredicted RBP16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 DDR2Q16832 855 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 HABP4Q5JVS0 413 aaKnown RBP16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 CATSPER1Q8NEC5 780 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 CATSPER2Q96P56 530 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 MRPL46Q9H2W6 279 aaKnown RBP16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 TCF7L2Q9NQB0 619 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 SNX10Q9Y5X0 201 aa16.03■□□□□ 0.16
CCDC85A-201ENST00000407595 TYW5A2RUC4 315 aaKnown RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 TPP1O14773 563 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 POLBP06746 335 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 UQCRBP14927 111 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 SPRP35270 261 aaPredicted RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 ASPAP45381 313 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 ZNF143P52747 638 aaPredicted RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 OGDHQ02218 1023 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 XYLT1Q86Y38 959 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 GABPB2Q8TAK5 448 aaPredicted RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 MARK4Q96L34 752 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 NRDE2Q9H7Z3 1164 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 HBS1LQ9Y450 684 aaKnown RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 SLC12A8A0AV02 714 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 MYBPHLA2RUH7 354 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 MAGEC1O60732 1142 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 THRAP10827 490 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 FGFR3P22607 806 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 GRAMD4Q6IC98 578 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 ZBTB46Q86UZ6 589 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 PANX3Q96QZ0 392 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 FRMD8P1Q9BZ68 369 aaPredicted RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 ETNK2Q9NVF9 386 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 DCDC2Q9UHG0 476 aa16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.16
CCDC85A-201ENST00000407595 SDR42E2A6NKP2 422 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 MEIS3P2A8K0S8 358 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 TRUB2O95900 331 aaKnown RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 ERVK-10P10266 1014 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 NPR3P17342 541 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 MGAT1P26572 445 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 HTRA3P83110 453 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 ACBD5Q5T8D3 534 aaPredicted RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 DCAKDQ8WVC6 231 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 PIWIL1Q96J94 861 aaKnown RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 FRMD8Q9BZ67 464 aaPredicted RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 SFMBT1Q9UHJ3 866 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 PPME1Q9Y570 386 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 MYO18AQ92614 2054 aaKnown RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 C15orf38-AP3S2A0A0A6YYH1 394 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 LHX1P48742 406 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 NSUN2Q08J23 767 aaKnown RBP eCLIP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 POU6F1Q14863 301 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 PRKD1Q15139 912 aaPredicted RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 TRMT10BQ6PF06 316 aaKnown RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 TRIM67Q6ZTA4 783 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 ARPINQ7Z6K5 226 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 B3GALT6Q96L58 329 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 SPATA16Q9BXB7 569 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 HMX1Q9NP08 348 aaPredicted RBP16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 VANGL2Q9ULK5 521 aa16.02■□□□□ 0.15
CCDC85A-201ENST00000407595 F8W8V4 182 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 LTFP02788 710 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 BPGMP07738 259 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 FAM58BPP0C7Q3 252 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 ADARP55265 1226 aaKnown RBP16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 LILRA4P59901 499 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 ACTR3P61158 418 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 USP46P62068 366 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 PLOD1Q02809 727 aaPredicted RBP16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 KYQ8NBH2 561 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 FBXO27Q8NI29 283 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 DIS3LQ8TF46 1054 aaKnown RBP16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 PRDM12Q9H4Q4 367 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 TMPRSS4Q9NRS4 437 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 WARS2Q9UGM6 360 aaKnown RBP16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 MDM4O15151 490 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 BUD23O43709 281 aaKnown RBP16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 TGDSO95455 350 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 GRK2P25098 689 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 IL1R2P27930 398 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 TRIM32Q13049 653 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 ITGA7Q13683 1181 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 PDK2Q15119 407 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 KCTD21Q4G0X4 260 aa16.01■□□□□ 0.15
CCDC85A-201ENST00000407595 STRA8Q7Z7C7 330 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms